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. 2012 Feb 21;7(2):e31832. doi: 10.1371/journal.pone.0031832

Table 1. Mutants from Colony Morphology Screens.

Function Gene # Gene name Nearest homology Biofilm Swarm
EPS/LPS 4680 wbu B Sulfurimonas Up Down
4681 galE Vibrio cholerae Up No effect
4682 rfaG Rubrobacter Up Up
4679 Epimerase Polaromonas JS666 Up No effect
4678 Cap8m Polaromonas Up Down
4684 Cap5h Vibrio angustum Up n.d.
4686 wbpE Polaromonas Up Down
4674 epsB Polaromonas Down No effect
4685 Polysacch synthesis Roseiflexus Up Down
1089 Btwn hyp and epsA V. paradoxus S110 Up Up
1090 epsA V. paradoxus S110 Up Up
1093 exoY V. paradoxus S110 Up Down
1094 Unk in EPS locus Cupriavidus taiwanenis Down No effect
780 Glycosyltransferase Stenotrophomonas maltophilia Up n.d.
Signal 5483 tetR regulator Polaromonas Down n.d.
transduction 4665 shk S –sensor histidine kinase V. paradoxus S110 Up Down
1030 BH2933 Bacillus halodurans Up N.d.
Surface 5900 PilY1 Several species Mixed Mixed
proteins 2155 Filamentous Haemagglutinin OMP Comamonas testosteroni HecA Up No effect
4377 YaeC lipoprotein V. paradoxus S110 Up No effect
T6SS 5525 TM protein in T6SS region Xanthomonas oryzae Down n.d.
5533 EvpB type protein Cupriavidus Down No effect
Autotrophy 3601 RuBISCO Methanocaldococcus Down Down
3603 Phosphoribulo kinase Methylacidiphilum infernorum V4 Down No effect
Other 4383 SecA preprotein translocase Pseudomonas putida Up Down
1032 Phosphoglycerate mutase V. paradoxus S110 Down Down
2156 ShlB type polypeptide transport V. paradoxus S110 Up Up
2158 ShlB type polypeptide transport Ralstonia solanacearum Up n.d.
5158 TadE protein V. paradoxus S110 Down No effect
126 Hypothetical Ruegeria pomeroyi Up Down