Table 1. Mutants from Colony Morphology Screens.
Function | Gene # | Gene name | Nearest homology | Biofilm | Swarm |
EPS/LPS | 4680 | wbu B | Sulfurimonas | Up | Down |
4681 | galE | Vibrio cholerae | Up | No effect | |
4682 | rfaG | Rubrobacter | Up | Up | |
4679 | Epimerase | Polaromonas JS666 | Up | No effect | |
4678 | Cap8m | Polaromonas | Up | Down | |
4684 | Cap5h | Vibrio angustum | Up | n.d. | |
4686 | wbpE | Polaromonas | Up | Down | |
4674 | epsB | Polaromonas | Down | No effect | |
4685 | Polysacch synthesis | Roseiflexus | Up | Down | |
1089 | Btwn hyp and epsA | V. paradoxus S110 | Up | Up | |
1090 | epsA | V. paradoxus S110 | Up | Up | |
1093 | exoY | V. paradoxus S110 | Up | Down | |
1094 | Unk in EPS locus | Cupriavidus taiwanenis | Down | No effect | |
780 | Glycosyltransferase | Stenotrophomonas maltophilia | Up | n.d. | |
Signal | 5483 | tetR regulator | Polaromonas | Down | n.d. |
transduction | 4665 | shk S –sensor histidine kinase | V. paradoxus S110 | Up | Down |
1030 | BH2933 | Bacillus halodurans | Up | N.d. | |
Surface | 5900 | PilY1 | Several species | Mixed | Mixed |
proteins | 2155 | Filamentous Haemagglutinin OMP | Comamonas testosteroni HecA | Up | No effect |
4377 | YaeC lipoprotein | V. paradoxus S110 | Up | No effect | |
T6SS | 5525 | TM protein in T6SS region | Xanthomonas oryzae | Down | n.d. |
5533 | EvpB type protein | Cupriavidus | Down | No effect | |
Autotrophy | 3601 | RuBISCO | Methanocaldococcus | Down | Down |
3603 | Phosphoribulo kinase | Methylacidiphilum infernorum V4 | Down | No effect | |
Other | 4383 | SecA preprotein translocase | Pseudomonas putida | Up | Down |
1032 | Phosphoglycerate mutase | V. paradoxus S110 | Down | Down | |
2156 | ShlB type polypeptide transport | V. paradoxus S110 | Up | Up | |
2158 | ShlB type polypeptide transport | Ralstonia solanacearum | Up | n.d. | |
5158 | TadE protein | V. paradoxus S110 | Down | No effect | |
126 | Hypothetical | Ruegeria pomeroyi | Up | Down |