TABLE 3.
SNP markers showing association with the expression levels of genes positively correlated with fat area and their positions indicating cis-regulation
| Gene Symbol | Gene Location(Mb, SSC) | SNP | SNP Location(Mb, SSC) | Association−log10 (P) | R2a | Pb |
|---|---|---|---|---|---|---|
| CA7 | 103.0 (4) | ALGA0111689 | 108.0 (4) | 5.1 | 0.24 | 3.22E-03 |
| CYP1A2 | 64.3 (7) | MARC0013048 | 62.6 (7) | 5.9 | 0.19 | 1.75E-02 |
| CYP4F2 | 42.8 (2) | ALGA0013037 | 39.3 (2) | 5.5 | 0.20 | 1.56E-02 |
| FAM134B | 5.15 (16) | H3GA0045908 | 5.3 (16) | 12.5 | 0.29 | 3.68E-04 |
| FOXO1 | 15.1 (11) | ALGA0119631 | 22.7 (11) | 5.2 | 0.23 | 4.55E-03 |
| FOXRED1 | 51.7 (9) | ASGA0043161 | 51.8 (9) | 5.9 | 0.19 | 2.20E-02 |
| GSTT1 | 50.8 (14) | H3GA0040142 | 49.2 (14) | 6.2 | 0.18 | 2.39E-02 |
| HDHD2 | 291.0 (1) | MARC0011129 | 290.0 (1) | 9.7 | 0.20 | 1.43E-02 |
| PLIN4 | 48.7 (2) | ASGA0090304 | 48.6 (2) | 7.5 | 0.22 | 7.95E-03 |
| XYLB | 19.0 (13) | ALGA0068858 | 19.1 (13) | 17.5 | 0.18 | 2.49E-02 |
a
Correlation between expression and fat area.
b
P of correlation (R2).