TABLE 4.
SNP markers showing association with the expression levels of genes negatively correlated with fat area and their positions indicating cis-regulation
| Gene Symbol | Gene Location(Mb, SSC) | SNP | SNP Location(Mb, SSC) | Association−log10 (P) | R2a | Pb |
|---|---|---|---|---|---|---|
| ALDH18A1 | 112.0 (14) | DIAS0001032 | 112.0 (14) | 13.8 | −0.29 | 2.80E-04 |
| ANO10 | 22.6 (13) | M1GA0017465 | 22.9 (13) | 6.2 | −0.20 | 1.26E-02 |
| ANXA5 | 87.9 (8) | ALGA0048900 | 87.9 (8) | 18.8 | −0.33 | 4.00E-05 |
| B4GALT5 | 53.5 (17) | M1GA0022228 | 53.5 (17) | 8.5 | −0.29 | 3.72E-04 |
| BRD2 | 29.5 (7) | M1GA0009853 | 32.8 (7) | 6.4 | −0.22 | 7.55E-03 |
| C1orf57 | 59.3 (14) | H3GA0040407 | 59.2 (14) | 18.7 | −0.21 | 9.43E-03 |
| ENSA | 103.0 (4) | H3GA0013772 | 104.0 (4) | 6.6 | −0.21 | 1.20E-02 |
| H2AFY | 125.0 (2) | CASI0010120 | 125.0 (2) | 6.0 | −0.20 | 1.35E-02 |
| HS2ST1 | 34.9 (9) | ASGA0042539 | 35.2 (9) | 9.5 | −0.21 | 9.70E-03 |
| MRPL44 | 118.0 (15) | ASGA0070945 | 118.0 (15) | 7.9 | −0.21 | 1.09E-02 |
a
Correlation between expression and fat area.
b
P of correlation (R2).