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. Author manuscript; available in PMC: 2013 Jan 10.
Published in final edited form as: J Chem Theory Comput. 2012 Jan 10;8(1):348–362. doi: 10.1021/ct200723y

Figure 4.

Figure 4

Percent BII conformation as a function of nucleotide for EcoR1 from experiment and from the MD simulations using the C27, C27_2b and AMBER Parm99bsc0 force fields. Data for the symmetrically related basepair steps have been combined.