TABLE 1.
miRNAs that are highly expressed in yolk sac of E9.5 embryos
miRNAs that share the same seed sequence are highlighted with bold type. ES, embryonic stem cell.
| miRNAs | Signal intensity of array | Chromosomal location |
|---|---|---|
| miRNAs from miR-17–92 clusters | ||
| mmu-miR-17_st | 53,668 | 14:115442893–115442976 (+) |
| mmu-miR-18a_st | 9,035 | 14:115443073–115443168 (+) |
| mmu-miR-20a_st | 33,302 | 14:115443379–115443485 (+) |
| mmu-miR-19b_st | 11,566 | 14:115443527–115443613 (+) |
| mmu-miR-92a_st | 14,154 | 14:115443649–115443728 (+) |
| mmu-miR-93_st | 9,980 | 5:138606751–138606838 (−) |
| mmu-miR-106b_st | 6,750 | 5:138606965–138607046 (−) |
| mmu-miR-20b_st | 3,703 | X:50095290–50095369 (−) |
| mmu-miR-106a_st | 14,217 | X:50095680–50095744 (−) |
| ES-enriched miRNAs from the same cluster | ||
| mmu-miR-290–5p_st | 49,621 | 7:3218627–3218709 (+) |
| mmu-miR-292–3p_st | 55,769 | 7:3219190–3219271 (+) |
| mmu-miR-292–5p_st | 17,935 | 7:3219190–3219271 (+) |
| mmu-miR-293_st | 51,770 | 7:3220344–3220423 (+) |
| miRNAs from imprinted Dlk1-Dio3 region | ||
| mmu-miR-665_st | 4,870 | 12:110824524–110824617 (+) |
| mmu-miR-431_st | 7,934 | 12:110828657–110828747 (+) |
| mmu-miR-433_st | 6,057 | 12:110829925–110830048 (+) |
| mmu-miR-127_st | 35,477 | 12:110831056–110831125 (+) |
| mmu-miR-379_st | 13,643 | 12:110947270–110947335 (+) |
| mmu-miR-494_st | 9,217 | 12:110953528–110953612 (+) |
| mmu-miR-376b_st | 4,240 | 12:110961668–110961749 (+) |
| mmu-miR-382_st | 5,357 | 12:110971981–110972056 (+) |
| mmu-miR-134_st | 7,051 | 12:110972349–110972419 (+) |
| mmu-miR-541_st | 35,658 | 12:110980619–110980708 (+) |
| mmu-miR-409–3p_st | 16,673 | 12:110981368–110981446 (+) |
| miRNAs from intron of Smfbt | ||
| mmu-miR-467c_st | 4,033 | 2:10395558–10395654 (+) |
| mmu-miR-466b-3p_st | 3,183 | 2:10395846–10395927 (+) |
| mmu-miR-467a_st | 23,477 | 2:10397973–10398045 (+) |
| mmu-miR-669c_st | 8,510 | 2:10430923–10431031 (+) |
| miRNAs from intron of Smc4 | ||
| mmu-miR-15b_st | 2,861 | 3:68813694–68813757 (+) |
| mmu-miR-16_st | 33,558 | 3:68813824–68813918 (+) |
| Other miRNAs | ||
| mmu-miR-103_st | 12,760 | 11:35595898–35595983 (+) |
| mmu-miR-107_st | 9,382 | 19:34895177–34895263 (−) |
| mmu-miR-130b_st | 3,821 | 16:17124154–17124235 (−) |
| mmu-miR-130a_st | 6,022 | 2:84581272–84581335 (−) |
| mmu-miR-200c_st | 14,221 | 6:124668340–124668408 (−) |
| mmu-miR-126–3p_st | 8,895 | 2:26446877–26446949 (+) |
| mmu-miR-709_st | 372,600 | 8:86609998–86610085 (+) |
| mmu-miR-23a_st | 2,953 | 8:86732417–86732491 (+) |
| mmu-miR-191_st | 11,217 | 9:108470650–108470723 (+) |
| mmu-miR-805_st | 3,934 | MT:16115–16209 (−) |
| mmu-miR-185_st | 2,970 | 16:18327494–18327558 (−) |
| mmu-miR-690_st | 62,347 | 16:28600021–28600129 (−) |
| mmu-miR-1195_st | 15,164 | 17:71209818–71209940 (−) |
| mmu-miR-26a_st | 21,528 | 10:126432586–126432669 (+) |
| mmu-miR-22_st | 5,738 | 11:75277218–75277312 (+) |
| mmu-miR-685_st | 4,898 | 14:51427159–51427267 (−) |
| mmu-miR-351_st | 3,680 | X:50406432–50406530 (−) |