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. Author manuscript; available in PMC: 2012 Feb 23.
Published in final edited form as: J Genet. 2010 Dec;89(4):417–423. doi: 10.1007/s12041-010-0060-8

Table 1.

Thirty-five ancestry informative markers with NCBI reference numbers, chromosomal locations and allele frequencies in European, African and Native Americans.

Marker
name
dbSNP
rs no.
Location Allele frequencies

African European Native American
TYR-192 rs1042602 11q21 0.00 0.47 0.05
OCA2 rs1800404 15q13.1 0.14 0.72 0.48
DRD2-Taq rs1800498 11q23.1 0.14 0.65 0.09
TSC0003523 rs1985080 7p14.3 0.10 0.64 0.97
TSC0745571 rs203096 17q21.33 0.65 0.72 0.28
TSC1102055 rs2065160 1q32.1 0.50 0.92 0.17
TSC0042312 rs2077863 18p11 0.51 0.93 0.93
WI-4019 rs2161 7q22.1 0.44 0.30 0.62
MC1R-314 rs2228478 16q24.3 0.51 0.14 0.04
rs223830 16q13 0.03 0.19 0.64
TSC1023401 rs235936 21q21.3 0.18 0.49 0.37
WI-11909 rs2695 9q21.31 0.81 0.86 0.22
WI-11392 rs2752 1q42.2 0.88 0.43 0.63
FY-null rs2814778 1q23.2 0.00 0.99 0.99
WI-7423 rs2816 17p12 0.00 0.49 0.08
LPL rs285 8p21.3 0.97 0.52 0.45
WI-14319 rs2862 15Q14 0.38 0.17 0.69
WI-14867 rs2891 17p13.2 0.02 0.51 0.43
CRH rs3176921 8q13.1 0.32 0.93 0.98
WI-16857 rs3287 2p16.1 0.73 0.20 0.21
SGC30610 rs3309 5q11.2 0.40 0.28 0.69
SGC30055 rs3317 5q23.1 0.05 0.59 0.73
WI-17163 rs3340 5q33.2 0.06 0.19 0.65
CYP19 rs4646 15q21.2 0.32 0.29 0.72
TSC0879894 rs518116 9q33.3 0.13 0.67 0.58
GNB3 rs5443 12p13.31 0.80 0.33 0.36
TSC1157118 rs584059 3q22.3 0.49 0.14 0.47
F13B rs6003 1q31.3 0.70 0.08 0.03
GC1 rs7041 4q13.3 0.93 0.41 0.45
TSC0050288 rs722098 21q21.1 0.90 0.18 0.72
TSC0053441 rs723632 1q32.3 0.10 0.92 0.67
TSC0000409 rs7349 10p11.22 0.04 0.87 0.96
TSC0030203 rs736394 14q32.12 0.52 0.74 0.99
TSC0255473 rs930072 5p13.2 0.96 0.10 0.45
TSC0316844 rs994174 10q23.1 0.76 0.25 0.26

AIMs markers and allele frequencies are compiled from Salari et al. 2005; Choudhry et al. 2006; Ziv et al. 2006.