Table 3.
Homologs of human polyadenylation factors in nematode, plants, yeast, and archaea. Protein sequences of basal polyadenylation factors from human were compared to other species found in Table 1 to find the homologous factors.
| Human | Nematode | Rice | Thale cress | Wine grape | Fission yeast | Budding yeast | Archaea | |
|---|---|---|---|---|---|---|---|---|
| CPSF complex | CPSF1 | CPSF-1 | Os04g0252200 | CPSF160 | LOC100256706 | CFT1 | CFT1p | |
| CPSF2 | CPSF-2 | Os09g0569400 | CPSF100 | LOC100267865 | CFT2 | CFT2p | EPF1 | |
| CPSF3 | CPSF-3 | Os03g0852900 | CPSF73-I | LOC100261042 | YSH1 | YSH1 | EPF2 | |
| CPSF73-II | ||||||||
| CPSF4 isoform 1 | CPSF-4 | Os06g0677700 | CPSF30 | LOC100253258 | YTH1 | YTH1 | ||
| CPSF4 isoform 2 | ||||||||
| FIP1L1 isoform 1 | F32D1.9 | Os01g0377500 | FIP1[V] | LOC100251960 | SPAC22G7.10 | Fip1p | ||
| FIP1L1 isoform 2 | ||||||||
| FIP1L1 isoform 3 | ||||||||
|
| ||||||||
| CstF complex | CSTF1 isoform 1 | CPF-1 | Os03g0754900 | AT5G60940 | LOC100267233 | |||
| CSTF1 isoform 2 | ||||||||
| CSTF1 isoform 3 | ||||||||
| CSTF2 | CPF-2 | Os11g0176100 | CSTF64 | LOC100256296 | CTF1 | RNA15 | ||
| CSTF2T | ||||||||
| CSTF3 isoform 1 | SUF-1 | Os12g0571900 | CSTF77 | LOC100262033 | RNA14 | RNA14 | ||
| CSTF3 isoform 2 | ||||||||
| CSTF3 isoform 3 | ||||||||
|
| ||||||||
| CF1m | CPSF6 | D1046.1 | Os09g0476100 | AT5G55670 | LOC100268141 | |||
| CSPF7 | AT1G13190 | |||||||
| NUDT21 | F43G9.5 | Os04g0683100 | AT4G25550 | LOC100261950 isoform 1 | ||||
| CFIIM-25 | LOC100261950 isoform 2 | |||||||
|
| ||||||||
| CFIIm | CLP1 | F59A2.4 | Os02g0217500 | CLPS5 | LOC100242380 | SPAC22H10.05c | Clp1p | |
| PCF11 | R144.2 | Os09g0566100 | PCFS4 | LOC100251089 | SPAC4G9.04c | PCF11 | ||
|
| ||||||||
| Other factors | PAPOLA | Pap-1 | Os06g0319600 | PAPS1 | LOC100252483 | Pla1 | Pap1 | |
| PAPOLB | Os06g0558700 | PAPS2 | LOC100263460 | |||||
| PAPOLG | ||||||||
| SYMPK | F25G6.2 | Os07g0693900 | ESP4 | LOC100266091 | PTA1 | PTA1 | ||
|
| ||||||||
| PABP | PABPC1 | PAB-1 | Os08g0314800 | PAB2 | LOC100262903 | PABP | PAB1 | |
| PABPC3 | PABP5 | LOC100255846 | ||||||
| PABPC4 | PAB5 | LOC100255846 | ||||||
| PABPN1 | PABP-2 | Os06g0219600 | AT5G10350 | LOC100242522 | PAB2 | SGN1 | ||
|
| ||||||||
| Homologs of yeast polyadenylation factors | WDR33 | R06A4.9 | Os04g0599800 | FY | LOC100263567 | PFS2 | PFS2 | |
| RBBP6 | TAG-214 | Os10g0431000 | AT5G47430 | LOC100252571 | SPBP8B7.15c | MPE1 | ||
| PPP1CA | GSP-2 | OS03g0268000 | TOPP7 | LOC100256994 | DIS2 | GLC7 | ||
| PPP1CB | GSP-1 | Os06g0164100 | TOPP4 | LOC100258649 | DIS2 | GLC7 | ||