Table 1.
Summary of 454 sequencing and assembly for P. notoginseng
| No. of sequences | No. of bases | |
|---|---|---|
| HQ reads | 188,185 | 77,079,504 |
| Average HQ read length | 410 ± 138 bp | |
| Reads used in assembly | 184,785 | 75,152,969 |
| Reads assembled as contigs | 164,855 | 65,067,207 |
| Number of contigs | 14,005 | 8,131,261 |
| Average length of contigs | 581 ± 404 bp | |
| Range of contig lengths | 95 - 10,423 bp | |
| Contigs above 200 bp | 12,809 | 7,956,026 |
| Number of singletons | 16,847 | 5,775,116 |
| Average length of singletons | 343 ± 166 bp | |
| Range of singleton lengths | 50 - 728 bp | |
| Singletons above 200 bp | 12,365 | 5,310,178 |
| Number of unique sequencesa | 30,852 | |
| Unique sequences above 200 bases | 25,174 | |
a The total number of contigs and singletons.