Table 4.
Repeat composition | No. of unique sequences (relative percentage) |
---|---|
Dinucleotide | |
AC/CA/GT/TG | 167 (8.9%) |
AG/GA/CT/TC | 1073 (57.3%) |
AT/TA | 630 (33.7%) |
CG/GC | 2 (0.1%) |
Total of dinucleotide | 1872 (100%) |
Trinucleotide | |
AAC/CAA/ACA/GTT/TTG/TGT | 35 (5.1%) |
AAG/GAA/AGA/CTT/TTC/TCT | 152 (21.9%) |
AAT/TAA/ATA/ATT/TTA/TAT | 73 (10.5%) |
ACC/CAC/CCA/GGT/GTG/TGG | 62 (8.9%) |
ACG/CGA/GAC/CGT/GTC/TCG | 15 (2.2%) |
ACT/CTA/TAC/AGT/TAG/GTA | 28 (4%) |
AGC/CAG/GCA/TGC/CTG/GCT | 116 (16.7%) |
AGG/GGA/GAG/TCC/CTC/CCT | 74 (10.7%) |
ATC/CAT/TCA/GAT/ATG/TGA | 113 (16.3%) |
CCG/CGC/GCC/GGC/GCG/CGG | 25 (3.6%) |
Total of trinucleotide | 693 (100%) |