Table 2.
Rank and nominal p-value from the association test between Q1 and the genes in the VEGF pathway included in the simulating model for Q1
ARNT | ELAVL4 | FLT1 | FLT4 | HIF1A | HIF3A | KDR | VEGFA | VEGFC | |
---|---|---|---|---|---|---|---|---|---|
Rank | 112 | 1,007 | 1 | 1,013 | 698 | 544 | 34 | 985 | 214 |
p-value | 0.009 | 0.1359 | 2.4 × 10−13 | 0.1441 | 0.0885 | 0.0616 | 0.0017 | 0.1380 | 0.0186 |
The smallest p-value from either single SNP association of common variants or aggregate of rare variants within a gene was chosen to represent the gene. All models were adjusted for age, sex, smoking, and principal components.