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. 2011 Nov 29;5(Suppl 9):S45. doi: 10.1186/1753-6561-5-S9-S45

Table 5.

Power of rare SNPs in the VEGF pathway

Trait Database Number of rare SNPs Number of causal rare SNPs P-valuea Power (%) (true positives)
Q1 BioCarta 95 33 9.34 × 10−4 9.1 (3)
Reactome 53 25 5.26 × 10−4 16.0 (4)
KEGG 66 11 7.58 × 10−4 18.2 (2)

Disease BioCarta 95 5 9.34 × 10−4 0 (0)
Reactome 53 0 5.26 × 10−4 0 (0)
KEGG 66 7 7.58 × 10−4 0 (0)

a Significant at corrected significance level 0.05.