Table 2.

Marker name, gene homology, and size of Indel polymorphism for the CISP markers in parents H 77/89-33 and PRLT 2/89-33

CISP marker*	Gene homology	Size of Indel
Xibmcp01	Heat Shock protein	9 bp
Xibmcp02	Ribosomal protein L24	12 bp
Xibmcp03	Transmembrane amino acid transporter	12 bp
Xibmcp04	Transaldolase	61 bp
Xibmcp05	C2 domain	6 bp
Xibmcp06	Adenosyl homocysteinase	4 bp
Xibmcp07	Phosphate translocator	5 bp
Xibmcp08	Phosphoglycerate kinase	2 bp
Xibmcp09	Chlorophyll A/B binding protein	1 bp
Xibmcp10	Delta-1-pyrroline-5-carboxylate synthetase	1 bp
Xibmcp11	Protein phosphatase 1 regulatory subunit SDS22	3 bp
Xibmcp12	Expressed protein	2 bp

*The sequences of forward and reverse primers are provided in supplementary Additional file 2: Table S2