Table 4. Comparison between simulated 454 read assemblies and transcriptome.
CAP3 | MIRA | Newbler | Oases | MA | |
Specificity absolute | 42'697/45'422 | 37'587/40'129 | 8'932/9'774 | 10'398/11'355 | 23'737/24'993 |
Specificity relative | 94.00% | 93.67% | 91.39% | 91.57% | 94.97% |
Sensitivity absolute | 3'140/146'962 | 14'920/146'962 | 18'723/146'962 | 9'379/146'962 | 23'985/146'962 |
Sensitivity relative | 2.14% | 10.15% | 12.74% | 6.38% | 16.32% |