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. 2011 Oct 14;9(Suppl 1):S14. doi: 10.1186/1477-5956-9-S1-S14

Table 1.

Optimal parameter sets of algorithms

Algorithm Parameter Search range Optimal value
NWE restart probability 0.6,0.7,0.8 0.6
early cutoff 0.5, 0.6, 0.7 0.5
overlap ratio 0.1, 0.2, 0.3 0.3
minimum cluster size 4 4
maximum cluster size 11, 50, 100 100

RRW restart probability 0.6,0.7,0.8 0.6
early cutoff 0.5, 0.6, 0.7 0.5
overlap ratio 0.1, 0.2, 0.3 0.3
minimum cluster size 4 4
maximum cluster size 11, 50, 100 100

MCL inflation 1.1, 1, 2, ⋯ , 3.0 1.6

The search spaces of parameter sets of NWE and RRW are determined based on the default parameter set of RRW [17]. MCL is optimized in the inflation parameter, whose default value is 2.0. All the combination of values of the parameters listed is evaluated.