. 2012 Jan 3;158(3):1158–1171. doi: 10.1104/pp.111.189167

Table I. Up- or down-regulated genes in aha1-6 mutant compared with wild-type plants on the complete nutrient growth condition.

Fold Change	P^a	Identifier	Annotation
Up-regulated genes^b
3.05	0.0498	At2g43140	Basic helix-loop-helix (bHLH) DNA-binding superfamily protein
2.77	0.0428	At2g04050	MATE efflux family protein
2.51	0.0373	At2g04040	ATDTX1_TX1_MATE efflux family protein
2.26	0.0377	At5g57240	ORP4C_OSBP (oxysterol-binding protein)-related protein 4C
2.20	0.0414	At3g23150	ETR2_signal transduction His kinase, hybrid type, ethylene sensor
2.09	0.0455	At5g43450	2-Oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
2.07	0.0020	At2g39980	HXXXD-type acyl-transferase family protein
2.06	0.0238	At5g45820	CIPK20_PKS18_SnRK3.6_CBL-interacting protein kinase 20
2.02	0.0174	At2g36690	2-Oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Down-regulated genes^c
6.14	0.0500	At3g30720	QQS_qua-quine starch
2.84	0.0225	At2g18960	AHA1, OST2_PMA_H⁺-ATPase 1
2.43	0.0036	At4g03060	AOP2, alkenyl hydroxyalkyl producing 2
2.38	0.0495	At3g45140	ATLOX2_lipoxygenase 2

The paired t test was used to calculate the two-tailed P value to determine statistical significance with 95% confidence.

The nine genes that are significantly up-regulated greater than 2-fold in the aha1-6 mutant represent 0.040% of the Arabidopsis genome (22,746 probe sets).

The four genes that are significantly down-regulated greater than 2-fold in the aha1-6 mutant represent 0.018% of the Arabidopsis genome (22,746 probe sets).