Table 3 . Descriptive statistics, including the LOD score, the position, 95% CI, PVE (%), the associated P-value, and the specific additive, and dominance effects of each QTL linked to every phenotype related to reproductive traits.
Phenotype | LG | Position(cM) | 95% CI (cM) | LOD | PVE, % | F Value | P Value (F) | Additive Effect | SE | Dominance Effect | SE | Nearest Marker |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Egg diameter | 11 | 0.0 | 0 - 11 | 5.193 | 10.62 | 4.432 | 0.044 | −0.8930 | 0.0936 | −0.8030 | 0.1345 | BX-870052i |
34 | 0.0 | 0 - 34 | 3.824 | 16.16 | 6.179 | 0.043 | 0.3635 | 0.0491 | 0.4824 | 0.3713 | BX319411i | |
17β-estradiol | 8 | 0.0 | 0 - 7 | 3.152 | 27.62 | 5.412 | 0.049 | 0.0360 | 0.0056 | 0.9562 | 0.1254 | sf000754_AC |
Sperm concentration | 6 | 21 | 2 - 48 | 3.831 | 18.58 | 5.543 | 0.052 | 0.0257 | 0.0061 | 0.3895 | 0.0327 | sf000891_02AC |
Spermatozoid head diameter | 16 | 42.9 | 37 - 42.9 | 5.290 | 14.95 | 9.146 | 0.029 | −1.2260 | 0.0333 | −0.4490 | 0.0190 | SFO-D91 |
Additive and dominance effect give insight in the mode of action of the genes underlying the variance of the traits. Moreover, direction (−/+) of the dominance or additive effects indicates which parent contributes to decrease the trait the phenotypic values in the studied trait. LOD, Log10 of the odd ratio; 95% CI, 95% confidence interval; PVE, percent variance explained; QTL, quantitative trait loci; SE, standard error.