TABLE 3.
Summary of NTD cognate and non-cognate TRS association binding parameters
Conditions were 50 mm KPi, 100 mm KCl, pH = 6.0 at 25.0 °C. Kobs values are averaged values from three independent fluorescence anisotropy titrations. ND, not determined. Errors report the S.D. of the triplicate measurements.
Protein | F-TRSa | Kobs (× 107m−1) | r0 | rcomplex |
---|---|---|---|---|
MHV NTD WT | MHV | 4.3 ± 0.4 | 0.063 | 0.212 |
IBV | 1.25 ± 0.05 | 0.072 | 0.211 | |
SARS-CoV | 0.306 ± 0.0005 | 0.064 | 0.133 | |
Scrambled | 1.70 ± 0.06 | 0.062 | 0.198 | |
MHV NTD R110A | MHVb | 4.1 ± 0.2 | 0.045 | 0.172 |
IBV | 0.66 ± 0.09 | 0.054 | 0.190 | |
MHV NTD Y129A | MHVb | 3.5 ± 0.3 | 0.054 | 0.190 |
IBV | 0.9 ± 0.2 | 0.072 | 0.195 | |
IBV NTD WT | IBV | 0.084 ± 0.001 | 0.070 | 0.170 |
MHV | 0.159 ± 0.02 | 0.068 | 0.211 | |
Scrambled | 0.179 ± 0.03 | 0.0622 | 0.176 | |
IBV NTD R76A | IBV | 0.0095 ± 0.0007 | 0.072 | 0.174 |
IBV NTD Y94A | IBV | 0.0453 ± 0.0004 | 0.068 | 0.174 |
SARS-CoV NTD WT | SARS-CoV | 0.277 ± 0.0009 | 0.061 | 0.133 |
MHV | 1.2 ± 0.03 | 0.069 | 0.171 | |
Scrambled | 0.81 ± 0.03 | 0.063 | 0.134 |
a RNA sequences are given in Table 2 (see also supplemental Fig. S9).
b Reported in Ref. 18.