Table 4. Discovery and replication of rs2000999 association data for Hp levels.
Haptoglobin (g/L) | ||||||||||
Population | Stage | N | MAF | GG | GA | AA | β | Standard error | raw P | P adjusted with rs10492825 |
SFS - unrelated children | Discovery | 631 | 0.21 | 0.736±0.406 | 0.532±0.321 | 0.361±0.180 | −0.123 | 0.017 | 6.32×10−13 | 1.95×10−07 |
SFS - families | Replication | 2,957 | 0.20 | 1.056±0.467 | 0.819±0.445 | 0.549±0.330 | −0.138 | 0.007 | 1.17×10−75 | |
Obese children | Replication | 1,015 | 0.22 | 1.261±0.492 | 1.064±0.455 | 1.002±0.534 | −0.088 | 0.013 | 1.20×10−11 | |
GENDAI | Replication | 419 | 0.25 | 0.811±0.450 | 0.813±0.558 | 0.731±0.319 | −0.021 | 0.021 | 0.306 | |
Replication sample | Replication | 4,391 | 0.22 | 3.49×10−41 | ||||||
Overall meta-analysis | Replication | 5,022 | 8.09×10−59 |
N: sample size; MAF: Minor Allele Frequency; β:beta coefficient for the effect allele A.