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. 2012 Mar 5;7(3):e32697. doi: 10.1371/journal.pone.0032697

Table 1. Proteins differentially represented in S. coelicolor and S. coelicolor ΔargR.

spot IN(1) SCO n°(2) gene name annotated function(3) p-value up/down in ΔargR
6149 SCO0379 katA catalase 0.000 down
6577 SCO1570(a) argH argininosuccinate lyase 0.005 up
6655 SCO1580(a) argC N-acetyl-gamma-glutamyl-phosphate reductase 0.000 up
6550 SCO1814 inhA enoyl-(acyl carrier protein) reductase 0.007 Down
6445 SCO1935 tktA1 transketolase 0.033 Down
6497 SCO1945 tpiA triosephosphate isomerase 0.015 Down
6233 SCO1946 pgk phosphoglycerate kinase 0.008 Down
6193 SCO1947 gap1 glyceraldehyde-3-phosphate dehydrogenase 0.029 Down
6666 SCO1965 export associated protein 0.015 Down
6494 SCO1998 rpsA 30S ribosomal protein S1 0.009 Up
6143 SCO2198(a) glnA glutamine synthetase I 0.000 Down
6647 SCO2368 hypothetical protein 0.007 Down
6685 SCO2633 sodF superoxide dismutase 0.011 Up
6366 SCO3649 fba fructose-bisphosphate aldolase 0.012 Down
6264 SCO4770 guaB inosine-5′-monophosphate dehydrogenase 0.032 Down
6269 SCO4771 inositol-5′-monophosphate dehydrogenase 0.040 Down
6400 SCO4809 sucD succinyl-CoA synthetase subunit alpha 0.045 Down
6125 SCO4814 purH formyltransferase/IMP cyclohydrolase 0.030 Down
6167 SCO4837(b) glyA serine hydroxymethyltransferase 0.010 Down
6678 SCO4856(a) sdhA succinate dehydrogenase flavoprotein subunit 0.000 Up
6257 SCO4958 metB cystathionine gamma-synthase 0.027 Down
6340 SCO6282(a) cpkI enoyl-(acyl carrier protein) reductase 0.017 Down
6513 SCO7036(a) argG argininosuccinate synthase 0.000 Up
6771 SCO7510 cypH peptidyl-prolyl cis-trans isomerase 0.009 Down
6317 SCO7511 gap2 glyceraldehyde 3-phosphate dehydrogenase 0.026 Down
(1)

spot identification number automatically generated from ImageMaster software.

(2)

Among the 459 differentially transcribed genes, the products of seven genes were detected in the Proteomics experiments. Six genes showed the same transcriptomic and proteomic profile (a) and only one gene gave opposite results (b).

(3)

from ScoDB.