Skip to main content
. 2012 Mar 5;7(3):e33100. doi: 10.1371/journal.pone.0033100

Table 1. Primer and probe sequences for JAK2 exon 12.

Primers Sequence 5′-3′
JAK2exon12-Forw CAGATAAATCAAACCTTCTAGTCTTC
JAK2exon12-wt-Rev CAAATCTTCATTTCTGATTTTGTtA
JAK2exon12-N542-E543del-Rev TGACTTACAAATATCAAATCTCTGA
JAK2exon12-E543-D544del-Rev CAAATCTTCATTTCTGATTAAGTtA
JAK2exon12-K539L-Rev CAAATCTTCATTTCTGATTAAGTtA
JAK2exon12-H538-K539delinsL-Rev AAATATCAAATCTTCATTTCTGATTAAA
JAK2exon12-I540-E543delinsMK-Rev CAAATATCAAATCTTTCATTTTGTtA
JAK2exon12-H538QK539L-Rev CAAATCTTCATTTCTGATTAATTtA
JAK2exon12-R541-E543delinsK-Rev CAAATATCAAATCTTTGATTTTGTtA
JAK2exon12-F537-K539delinsL-Rev CAAATCTTCATTTCTGATTAACACtA
Primers only for quantitative determination
JAK2exon12-wt (N542-E543del)-Rev AATGACTTACAAATATCAAATCTTCA
JAK2exon12-V536-I546dup11-Rev TTTGTGAAACACTATCAAATCTTC
JAK2exon12-F537-I540delinsLV-Rev AAATATCAAATCTTCATTTCTCACTA
Probe
JAK2exon12 probe Fam-CCAACCTCACCAACATTACAGAGGCC-Tamra

Primers used for qPCR screening and quantitative determination consisting of a common forward primer and probe in addition to a mutation specific reverse primer. The primers listed for quantitative determination were only used exclusively for determination of mutant allele burden. Lowercase letters in sequences indicate intended mismatches.