Table 1.
Impact of concurrency in p-TAREF.
| # of processor/Mismatches | 8 | 4 | 2 | 1 |
|---|---|---|---|---|
| 4 | 1 Hour 43 min | 3 Hours 21 min | 5 Hours 01 min | 8 Hours 37 min |
| 3 | 1 Hours 17 min | 3 Hours 00 min | 4 Hours 34 min | 6 Hours 07 min |
| 2 | 46 min | 2 Hours 21 min | 3 Hours 53 min | 5 Hours 42 min |
| 1 | 42 min | 1 Hours 52 min | 3 Hours 14 min | 4 Hours 21 min |
| 0 | 37 min | 1 Hours 14 min | 2 Hours 05 min | 3 Hours 01 min |
| Target-Align | NA | NA | NA | 92 Hours 26 min |
p-TAREF was run over total 205 genes, with different number of processors, having Intel Xeon processors with 2.5 Ghz clock speed. The last row compares it with another tool Target-align, which is available as standalone, serially coded alignment based tool.