Table 1.
Spoligotyping oligonucleotide probes
| Probe | Sequence |
|---|---|
| spacer1 | TAGATATAAAAAGATTAAATCTTCTAGCGCACAT |
| spacer2 | TCACTACTCCTGAAGGTTATAATTTTTGCTATAA |
| spacer3 | TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG |
| spacer4 | CAGGCACTGGTTCACTAGACACTGTAACATCTAT |
| spacer5 | CAATAACAAGCGAGCCTTTTGTACTAGAAGGTTTA |
| spacer6 | CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA |
| spacer7 | ATAGAATACATAAGTGCAAATTATTAAATGTTAC |
| spacer8 | TGAATGTAGAAACCAGATGCCACGAATTATTAGA |
| spacer9 | TTTGTATAAACGTTCTGATATGACTTAGGTAATCT |
| spacer10 | CTAACCTGATTGCTCAACAAATAATGCTATTGGC |
| spacer11 | TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA |
| spacer12 | CTCACATCTTACCCTCAGGGCGGATATTGTGAATC |
| spacer13 | ATTAATAATATTTTAGAAGATTGGCACATAATA |
| spacer14 | TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT |
| spacer15 | ATTTTACCTTTTAACACATATTGATAGGCGT |
| spacer16 | TCCATAACTGAAACGTCCTTATGCCTCAACATAATG |
| spacer17 | GAATTTGTCGGCCGCATAGACCGCTTTTATCAAA |
| spacer18 | CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA |
| spacer19 | TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG |
| spacer20 | CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA |
| spacer21 | ACCAAGTCGAAACAACATACCGAGACCGTGTTGA |
| spacer22 | TACATTGTTACGTTCATTTCACTCAGTTTTTCATA |
| spacer23 | AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG |
| spacer24 | TTATAACATCGGGATGGCGGTTTATTGGTTAAGTAAC |
| spacer25 | TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG |
| spacer26 | TTTTTATCGTAAGCTTGATTAACTAGACATCTACTA |
| spacer27 | GTTTTAATTTAATCATTATTGCTTCCTTATTAA |
| spacer28 | TAAGATATTGGTCGATTGTTTGCAAGACGTCATCAAA |
| spacer29 | CTAAATCAGCAGTCATCAAAACCCATATGATTGT |
| spacer30 | TTCTCAGAATGGGAACGTTACACATCATATT |
| spacer31 | TTAAGTATACGTTTCTTTGGGCTATTAGTTCTAA |
| spacer32 | TTCTCATATTTTAAAACAATAGAGTAATTCATTTTA |
| spacer33 | AATCTTAATTTATGCGCCTTACCTTCTGCTTCATC |
| spacer34 | TATACTTAGACAATATCATCATTTCCTATGTTTCGA |
| spacer35 | GCTATTCCAGATAGGTAGTTGTTTAGAGCATTTTGT |
| spacer36 | TTCGATACTCCTTAGCGGTACTTGCTAAAGTAGTT |
| spacer37 | AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA |
| spacer38 | TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG |
| spacer39 | TTACTTCATGACCCGGACATTTTACTAAAAAAT |
| spacer40 | TCCTATACCTTGTCACAATTTCCTCATATGGCTC |
| spacer41 | CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG |
| spacer42 | TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC |