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. 2012 Mar;190(3):1131–1137. doi: 10.1534/genetics.111.135681

Table 3 . Influence on modularity (Mod) and scaled modularity (SMod) of distribution and correlations of effects for a model of 100 traits and 100 loci in five modules, each of 20 traits.

Threshold 1.96 3.09
Distribution Normal Wishart Normal Wishart
Mod SMod Mod SMod Mod SMod Mod SMod
ra re rma = rme = 0
0.0 0.0 0.109 0.11 0.151 0.05 0.198 0.18 0.240 −0.27
0.002 0.85 0.003 0.92 0.005 1.23 0.006 0.94
0.5 0.0 0.105 −0.77 0.141 −0.05 0.185 −0.07 0.215 −0.34
0.004 0.86 0.006 0.92 0.014 1.02 0.016 0.81
0.9 0.0 0.090 −3.80 0.117 −1.94 0.146 −1.00 0.135 −1.50
0.005 0.85 0.012 1.39 0.012 1.39 0.018 1.60
rma rme ra = re = 0
0.5 0.0 0.110 0.58 0.149 0.04 0.200 0.29 0.243 0.51
0.003 1.11 0.003 0.91 0.006 1.30 0.007 1.22
0.5 0.5 0.109 0.23 0.150 0.35 0.200 0.55 0.242 0.72
0.002 1.06 0.004 1.04 0.007 1.17 0.007 0.86
0.9 0.0 0.111 1.80 0.154 2.55 0.203 1.17 0.253 3.12
0.003 1.65 0.004 1.77 0.005 1.20 0.006 2.06

σa = 2. Top rows are means and bottom rows are SD (italics), each computed from 20 replicates.