Table 2.
Distribution of RSCU Values for Proline and Arginine Codons in BCpu, BBge, and BPam
BCpu |
BBge |
BPam |
||||
Count | RSCU | Count | RSCU | Count | RSCU | |
Pro | ||||||
CCU | 2848 | 2 | 3354 | 2.15 | 3395 | 2.07a |
CCC | 295 | 0.21 | 469 | 0.3 | 507 | 0.31a |
CCA | 2395 | 1.68 | 2124 | 1.36 | 2287 | 1.4 |
CCG | 170 | 0.12 | 290 | 0.19 | 363 | 0.22 |
Arg | ||||||
CGU | 1399 | 1.39 | 1491 | 1.27 | 1632 | 1.29 |
CGC | 35 | 0.03 | 103 | 0.09 | 154 | 0.12 |
CGA | 640 | 0.64 | 585 | 0.5 | 633 | 0.5 |
CGG | 140 | 0.14 | 102 | 0.09 | 174 | 0.14 |
AGA | 3449 | 3.43 | 4370 | 3.72 | 4352 | 3.44 |
AGG | 378 | 0.38 | 393 | 0.33 | 656 | 0.52 |
Note.—Presence of complementary acceptor tRNA anticodons is indicated in bold. Lost tRNA genes in BCpu are indicated in italics.
Annotated as pseudogene BPLAN_621ps in BPam, functional according to TFAM with anticodon AGG (see text).