Table 2.
Top 20 transcripts significantly up-regulated in the starved P.ovis mite sample.
| GenBank accession number | Probe ID | Sequence description | Homologous species | Minimum E-value | Fold change (starved P. ovis vs fed P. ovis) | FDR corrected p-value |
|---|---|---|---|---|---|---|
| FR748352 | Bu_002_h03 | Calcium-independent phospholipase A2-gamma | Tribolium castaneum | 1.6E-49 | 2.68 | 1.45E-05 |
| FR749255 | Bu_015_c09 | Heat shock protein HSP90-alpha | Ixodes scapularis | 5.67E-77 | 2.66 | 0.015 |
| - | Bu_016_f12 | - | - | - | 2.61 | 1.93E-05 |
| FR749314 | Bu_016_a06 | Lipase, family member K/J | Pan troglodytes | 2.93E-37 | 2.56 | 2.62E-07 |
| FR749136 | Bu_013_g02 | Ras-related GTP binding A | I. scapularis | 6.02E-46 | 2.5 | 2.79E-05 |
| FR748742 | Bu_007_c01 | ABC transporter | I. scapularis | 6.48E-62 | 2.47 | 1.54E-05 |
| FR748556 | Bu_005_b04 | - | - | - | 2.46 | 1.49E-05 |
| - | Bu_014_d11 | - | - | - | 2.44 | 0.002635 |
| FR749256 | Bu_015_c10 | Solute carrier family 27 (fatty acid transporter) | Nasonia vitripennis | 4.01E-40 | 2.43 | 0.00018 |
| FR749382 | Bu_016_h02 | RNA-binding protein MEX3C-like | Drosophila virilis | 0.00016 | 2.42 | 2.59E-08 |
| FR749562 | Bu_011_a04 | Tubulin beta-4 chain-like | Caernorhabditis briggsae | 1.46E-24 | 2.41 | 8.22E-05 |
| FR748807 | Bu_009_a04 | Polo-like kinase 3 | Nematostella vectensis | 5.49E-16 | 2.39 | 0.005 |
| FR749241 | Bu_015_b06 | MAD2 mitotic arrest deficient-like 1 | Branchiostoma floridae | 4.09E-50 | 2.39 | 8.73E-05 |
| FR749251 | Bu_015_c05 | Replication factor C subunit 5 | Acyrthosiphon pisum | 1.49E-89 | 2.39 | 0.0001 |
| FR749291 | Bu_015_f12 | Sporozoite asparagine-rich protein | Plasmodium falciparum | 4E-04 | 2.36 | 0.0016 |
| FR748903 | Bu_010_b08 | Exosome component 7 | I. scapularis | 6.59E-41 | 2.33 | 0.001273 |
| FR748544 | Bu_005_a03 | - | - | - | 2.32 | 3.73E-08 |
| FR749434 | Bu_017_d11 | Hydroxysteroid (17-beta) dehydrogenase | I. scapularis | 1.77E-13 | 2.3 | 0.000138 |
| FR749176 | Bu_014_c08 | - | - | - | 2.29 | 0.000162 |
| FR749632 | Bu_011_g07 | Ankyrin repeat domain-containing protein 49 | Saccoglossus kowalevskii | 2.52E-32 | 2.29 | 0.004882 |
Probe ID represents the unique identifier for the microarray probe. FDR corrected p-value shows the Benjamini & Hochberg False Discovery Rate (FDR) corrected p-value for each transcript [23]. E-value is the Expect value which describes the number of BLAST hits one can expect to see by chance for a given sequence, the lower the E-value the more significant the match.