Table 1.
Primer | Sequence (5'-3') | Reference |
---|---|---|
emm/emmL typing primers | ||
emm 1"all M" - F | GGGGGGGGATCCATAAGGAGCATAAAAATGGCT | [26] |
emm 1"all M"- R | GGGGGGGAATTCAGCTTAGTTTTCTTCTTTGCG | |
emm 2 - F | TATTSGCTTAGAAAATTAA | [27] |
emm 2 - R | GCAAGTTCTTCAGCTTGTTT | |
emmL - G1F | AAAAATAAGGAGAAAAAATGG | [5] |
emmL - G1R | TTTTTAGTTTTCTTCTTTGCG | |
Superantigen primers | ||
speC - F | GGTAAATTTTTCAACGACACACACATTAAA | |
speC - R | TGTTGAGATTCTCCCGAAATAAATAGAT | |
speG - F | GCTATGGAAGTCAATTAGCTTATGCAGAT | |
speG - R | TTATGCGAACAGCCTCAGAGG | |
speJ - F | CAATTAAATTACGCATACGAAATCATACCAGTA | |
speJ - R | ACGAGTAAATATGTACGGAAGACCAAAAATA | |
speK - F | TATCGCTTGCTCTATACACTACTGAGAGT | |
speK - R | CCAAACTGTAGTATTTTCATCCGTATTAAA | [21] |
speL - F | GGACGCAAGTTATTATGGATGCTCA | |
speL - R | TTAAATAAGTCAGCACCTTCCTCTTTCTC | |
speA1-3,5-F | GGTATTTGCTCAACAAGACCCCGAT | |
speA1-3,5-R | TGTGTTTGAGTCAAGCGTTTCATTATCT | |
speA1-4-F | CAAGAAGTATTTGCTCAACAAGACCCCA | |
speA1-4-R | TTAGATGGTCCATTAGTATATAGTTGCTTGTTATC | |
speH -F | TCTATCTGCACAAGAGGTTTGTGAATGTCCA | |
speH -R | GCATGCTATTAAAGTCTCCATTGCCAAAA | |
speI -F | AAGGAAAAATAAATGAAGGTCCGCCAT | |
speI -R | TCGCTTAAAGTAATACCTCCATATGAATTCTTT | |
speM -F | GCTTTAAGGAGGAGGAGGTTGATATTTATGCTCTA | |
speM -R | CAAAGTGACTTACTTTACTCATATCAATCGTTTC | |
smeZ-F | CAATAATTTCTCGTCCTGTGTTTGGAT | |
smeZ-R | GATAAGGCGTCATTCCACCATAG | |
ssa -F | AATTATTATCGATTAGTGTTTTTGCAAGTA | |
ssa -R | AGCCTGTCTCGTACGGAGAATTATTGAACTC |