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. 2012 Feb 2;11:3. doi: 10.1186/1476-0711-11-3

Table 1.

List of primers used in this study

Primer Sequence (5'-3') Reference
emm/emmL typing
primers
emm 1"all M" - F GGGGGGGGATCCATAAGGAGCATAAAAATGGCT [26]
emm 1"all M"- R GGGGGGGAATTCAGCTTAGTTTTCTTCTTTGCG
emm 2 - F TATTSGCTTAGAAAATTAA [27]
emm 2 - R GCAAGTTCTTCAGCTTGTTT
emmL - G1F AAAAATAAGGAGAAAAAATGG [5]
emmL - G1R TTTTTAGTTTTCTTCTTTGCG
Superantigen primers
speC - F GGTAAATTTTTCAACGACACACACATTAAA
speC - R TGTTGAGATTCTCCCGAAATAAATAGAT
speG - F GCTATGGAAGTCAATTAGCTTATGCAGAT
speG - R TTATGCGAACAGCCTCAGAGG
speJ - F CAATTAAATTACGCATACGAAATCATACCAGTA
speJ - R ACGAGTAAATATGTACGGAAGACCAAAAATA
speK - F TATCGCTTGCTCTATACACTACTGAGAGT
speK - R CCAAACTGTAGTATTTTCATCCGTATTAAA [21]
speL - F GGACGCAAGTTATTATGGATGCTCA
speL - R TTAAATAAGTCAGCACCTTCCTCTTTCTC
speA1-3,5-F GGTATTTGCTCAACAAGACCCCGAT
speA1-3,5-R TGTGTTTGAGTCAAGCGTTTCATTATCT
speA1-4-F CAAGAAGTATTTGCTCAACAAGACCCCA
speA1-4-R TTAGATGGTCCATTAGTATATAGTTGCTTGTTATC
speH -F TCTATCTGCACAAGAGGTTTGTGAATGTCCA
speH -R GCATGCTATTAAAGTCTCCATTGCCAAAA
speI -F AAGGAAAAATAAATGAAGGTCCGCCAT
speI -R TCGCTTAAAGTAATACCTCCATATGAATTCTTT
speM -F GCTTTAAGGAGGAGGAGGTTGATATTTATGCTCTA
speM -R CAAAGTGACTTACTTTACTCATATCAATCGTTTC
smeZ-F CAATAATTTCTCGTCCTGTGTTTGGAT
smeZ-R GATAAGGCGTCATTCCACCATAG
ssa -F AATTATTATCGATTAGTGTTTTTGCAAGTA
ssa -R AGCCTGTCTCGTACGGAGAATTATTGAACTC