Table 2.

Predicted inversions on chromosome 17 for the CEU and YRI populations on genotype data (window size 0.4Mb and t_B = 50).

Population	LBPmin	LBPmax	RBPmin	RBPmax	MaxBic	invFreq	Ns
CEU	21.96788	22.09834	22.37082	22.50184	99.32	0.25	24
	24.96601	25.14566	25.36840	25.54785	137.18	0.47	265
	41.07267	41.64131	41.47280	42.09285	196.52	0.22	444
	53.84780	54.18923	54.25283	54.59168	322.95	0.28	802
YRI	21.88505	22.11686	22.36658	22.52599	111.94	0.39	9
	24.99465	25.09088	25.39824	25.49422	79.01	0.57	11
	53.90580	54.11198	54.30626	54.51477	235.38	0.46	12

One of the CEU predictions corresponds to a known inversion at 17q21, and was also found with window size 0.7Mb (see main text). Consistent with experimental evidence this is a CEU specific inversion, no inversions where predicted in the YRI population in this region with any window size.