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. 2012 Feb 13;12:66. doi: 10.1186/1471-2407-12-66

Table 1.

PCR primers and thermal cycling conditions

Methods Primers Sequence
BSP Forward: 5'-AAGAAAAGAAAAGAAAAGAAAATTTAG-3'
Reverse: 5'-TTTAGTGAGGTAGATAATTTTTT-3'
PCR conditions Initial denaturation at 95°C (10 min) and 35 cycles at 95°C (3 s), 52°C (3 s), 72°C (5 s), and a final extension at 72°C (10 s)

MSP Methylation- Forward: 5'-TAGATAATTTTTTTTAGATTTTGCGGTCG-3'
Specific Reverse: 5'-TCCTCGCGAAACTACGC-3'
PCR condition Initial denaturation at 95°C (10 min) and annealing temperature decrement of 0.5°C every cycle (from 70°C to 66.5°C) followed by 32 cycles of 66°C (3 s), 72°C (5 s), and a final extension at 72°C (10 s)

MSP Non-methylation Forward: 5'-TAGATAATTTTTTTTAGATTTTGTGGTTG-3'
-specific Reverse: 5'-TCCTCACAAAACTACAC-3'
PCR condition Initial denaturation at 95°C (10 min) and annealing temperature decrement of 0.5°C every cycle (from 64°C to 60.5°C) followed by 32 cycles of 60°C(3 s), 72°C (5 s), and a final extension at 72°C (10 s)