Fig. 3.

MAF-stratified medians of the three tests on the imputed SNPs from the Oral Clefts project. ${\text{FBAT}}_{\text{call}}$, TDT using complete trios; ${\text{FBAT}}_{\text{wight}}$, TDT using the weighting strategy; and ${\text{FBAT}}_{\text{LRT}}$, the likelihood ratio test that assumes genotype-specific call rates.