Table 2.
Genetic Relatedness Between Spanish Flavivirus and Selected Other Flavivruses
| |
SOcFV |
SCxFV |
MMV |
|||
|---|---|---|---|---|---|---|
| Groups | Nt aa | Nt aa | Nt aa | |||
| MBV_JEG | 46.2 | 49.3 | 47.3 | 50.2 | 35 | 29.1 |
| MBV_AVG | 47.1 | 49 | 47.5 | 51.5 | 35 | 29.6 |
| MBV_NVG | 45.6 | 47.8 | 46.7 | 50 | 34.7 | 28.3 |
| MBV_SVG | 45.4 | 47.6 | 48.1 | 49.2 | 36.6 | 31.3 |
| MBV_DVG | 45.2 | 48.2 | 47.9 | 50.5 | 37.5 | 32.3 |
| MBV_KVG | 44.1 | 46.6 | 47.9 | 49.4 | 36.6 | 31.7 |
| MBV_YFG | 46.8 | 48.1 | 47.5 | 48.8 | 35.4 | 28.2 |
| Chaoyang | 44.7 | 48.1 | 45.7 | 50.2 | 27.7 | 16.3 |
| Uranotaenia | 45.9 | 50.4 | 47.7 | 51.8 | 37.5 | 35.6 |
| Tho | 45.1 | 48.5 | 47.6 | 49.2 | 33.8 | 27.1 |
| Lammi | 44.9 | 48.1 | 45 | 50.9 | 27.1 | 18 |
| MMV | 45.4 | 46 | 47.6 | 50.2 | — | — |
| SCxFV | 35 | 32.3 | — | — | 47.6 | 50.2 |
| SOcFV | — | — | 35 | 32.3 | 45.4 | 46 |
| Nakiwogo | 35.9 | 29.9 | 32.1 | 20.9 | 44.6 | 49.1 |
| Calbertado | 34.8 | 30.6 | 36.3 | 32.3 | 48.5 | 51.1 |
| AEFV | 67.1 | 82.4 | 63.9 | 82.4 | 69 | 86.4 |
| CxFV | 35.1 | 30.5 | 25.3 | 12.2 | 46.7 | 50.1 |
| KRV | 35.5 | 31.2 | 38.2 | 34.3 | 46 | 49.1 |
| CFA | 36.1 | 32.3 | 37.7 | 33.7 | 47.2 | 49.8 |
| Tamana | 65.2 | 81 | 65.9 | 80.7 | 64.3 | 80.5 |
Nucleotides distances are based on 874-nucleotide fragment of the non-structural NS5 gene. Amino acid distances are based on a 289-residue region of the NS5 gene, and were calculated using Mega4, Neighbor-Joining method and distancia-p model. The lowest numbers in each column is denoted in bold.
MBV, Mosquito Borne Virus, JEG, Japanese Encephalitis Group, AVG, Aroa Virus Group, NVG, Ntaya SVG DVG KVG YFG, AEFV, Aedes Flavivirus; KRV, Kamiti River virus; CFA, Cell Fusing Agent.