Table 1B.
Oligonucleotide primers for EBV gene expression profile and HLA class I, TAP1, TAP2 expressions by real-time RT-PCR
| Transcript | Primer name | Sequence 5'-3' | Co-ordinate (AJ507799.2) |
| EBNA2 | Y2/YH-T1F1 | GCTTAGCCAGTAACCCAGCACT | 35702-35711/36098-36109 |
| YH-R2 | TGCTTAGAAGGTTGTTGGCATG | 36181-36160 | |
| EBNA3A | BLRF3/BERF1-F1 | GGCTACGCGCATCGACACA | 80287-80293/80382-80393 |
| BERF1-R2 | TGTACATCTCGGTATTTGAAATCTGGG | 80445-80419 | |
| LMP1 | LMP1-F2 | TTGTATACTCCTACTGATGATCACCCTCC | 168768-168749/168670-168678 |
| LMP1-R2 | ACAATGCCTGTCCGTGCAAATTCC | 168623-168646 | |
| LMP2A | LMP2A-F1 | ATACGAAGAAGCGGGCAGAGG | 166435-166455 |
| LMP2A/B-R1 | GAGGTAGGGCGCAACAATTACAGG | 100-77 | |
| LMP2B | LMP2B-F1 | GGGAGGCCGTGCTTTAGGGG | 169422-169441 |
| LMP2A/B-R1 | GAGGTAGGGCGCAACAATTACAGG | 100-77 | |
| BART | BART-F1 | AGATGCCCTCCAGGTCAAAGA | 156884-156904 |
| BART-R1 | ATCCAGTGTCCCTCGTTTGG | 158669-158650 | |
| HLA class I* | HLA-A-F1 | AGGAGGAAGAGCTCAGATAGAAAA | 997-1020 |
| HLA-A-R1 | AAGCTGTGAGGGACACATCA | 1087-1068 | |
| TAP1** | TAP1-F1 | TCTCACCATAGCCAGTGCAG | 1034-1053 |
| TAP1-R1 | GTGGCCCATGGTGTTGTTAT | 1100-1080 | |
| TAP2*** | TAP2-F1 | TTCTCCTTTGGCAGCTCACT | 717-736 |
| TAP2-R1 | ATCCGCAAGTTGATTCGAGA | 796-777 | |
| B2M**** | B2M-F1 | TCACCCCCACTGAAAAAGATG | 329-349 |
| B2M-R1 | ATGATGCTGCTTACATGTCTCG | 430-409 |