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. 2012 Mar;86(6):3219–3229. doi: 10.1128/JVI.06712-11

Table 3.

Oligonucleotides used in this study

Primer Sequence (5′–3′)a Orientation Positionb Genotype
GV305 CAGRCAAGAGCCAATGTTCAGATGG Sense 4999 GII.4
GV306 GGCCTCAATTTGTGCTTGGAGC Antisense 6916 GII.4
GV308 GCTTGGAGCATCTCTTTRTCATG Antisense 6903 GII.4
GV315 CAAGGCAAGAGCCAATGTTTCGATGG Sense 5004 GII.g
GV316 CTGGTGATGATGTATTTACTGTCTCC Sense 5662 GII.12
GV317 GTGGCTYGAATTTGAGCTTGCAGC Antisense 6876 GII.12
a

Degenerate bases are R (A or G) and Y (T or C).

b

Relative to the sequence of Farmington Hills (GenBank accession number AY502023) for GII.4 and relative to the sequence of NSW199U (GenBank accession number GQ845370) for GII.g/GII.12.