Table 1.

Nudivirus-like transcripts from female stage 1 pupae and day 1 adult M. demolitor^a

Gene name	Locus	Adult mean RPKM (n = 6)	Pupal mean RPKM (n = 6)	P valueb	Putative functional role
helicase	3891	29	0	1.1e−05	DNA replication
integrase	3978	53	1	1.9e−07	DNA replication
	1667	48	0	6.7e−07	DNA replication
p47	703	128	233	0.03	RNA polymerase subunit
lef-4	2025	36	14	0.0002	RNA polymerase subunit
lef-8		283	176	NS	RNA polymerase subunit
lef-9	3218	72	54	NS	RNA polymerase subunit
lef-5	539: transcripts 2, 7, 8, 9	159	231	NS	Late gene expression
vlf-1	539: transcripts 1, 3,4, 5, 6, 10	144	98	NS	Late gene expression, capsid protein, DNA packaging
HzNVorf140 (vlf-1b)	3488	88	0	6.4e−08	Nudcleocapsid protein, DNA packaging
	2966	197	0	1.9e−05	Nudcleocapsid protein, DNA packaging
	2965	519	0	2.2e−08	Nudcleocapsid protein, DNA packaging
38K	318	511	2	4.0e−05	Nucleocapsid protein
vp91	4098	210	0	7.5e−08	Nucleocapsid protein
vp39		4,109	3	6.2e−06	Nucleocapsid protein
p74		1,320	2	1.1e−07	Per os infectivity
pif-1		382	0	6.4e−09	Per os infectivity
pif-2	226	448	0	9.4e−09	Per os infectivity
pif-3	767	150	0	9.4e−08	Per os infectivity
19 kDa	1791	597	2	1.7e−07	Per os infectivity
odv-e56	13843	5	0	1.2e−08	Per os infectivity
	1447	329	1	7.3e−06	Per os infectivity
	1083	217	1	4.6e−07	Per os infectivity
odv-e66	175	405	0	2.0e−09	ODV envelope protein
	1139	91	0	4.7e−13
	2331	197	0	3.1e−09
	4186	207	0	1.0e−08
	2730	244	0	1.0e−08
HzNVorf9-1		864	2	1.0e−06	Structural protein
HzNVorf9-2		761	0	1.7e−05	Structural protein
HzNVorf106	332	508	1	8.2e−08	Structural protein
PmV hypothetical protein	756	546	0	1.5e−06	Structural protein
					Structural protein
ac92	5801	95	0	6.9e−08	Sulfhydryl oxidase
	2756	162	0	1.30E−08
HzNVorf64		1,043	12	7.9e−08	Unknown
HzNVorf94	318	511	2	4.0e−05	Unknown
HzNVorf128	1167	107	85	NS	Unknown

^aExpression levels in pupae and adults are indicated by RPKM values (see Materials and Methods).

^bNS, not significant.