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. 2012 Mar;86(6):3293–3306. doi: 10.1128/JVI.06434-11

Table 4.

DNA polymerase domain-containing transcripts from M. demolitor ovariesa

Locus PFAM DNA polymerase domain Best nr hit Accession no. Best nr hit species Identity Adult mean RPKM (n = 6) Pupal mean RPKM (n = 6) P value
4754 DNA_pol_B, DNA_pol_B_exo1 DNA polymerase delta subunit BAJ78765.1 Vespa analis insularis 77% 58 46 NS
1052 DNA_pol_B, DNA_pol_B_exo1 DNA polymerase alpha subunit XP_001121438.2 Apis mellifera 50% 70 51 0.03
2371 DNA_pol_B, DNA_pol_B_exo1 DNA polymerase zeta subunit XP_001607949.1 Nasonia vitripennis 50% 45 35 NS
1137 DNA_pol_B, DNA_pol_B_exo1, DNA_pol_B_exo2 DNA polymerase epsilon subunit XP_393171.4 Apis mellifera 68% 23 21 NS
921 DNA_pol_A DNA polymerase subunit gamma-1, mitochondrial EFN71060.1 Camponotus floridanus 62% 15 38 0.001
1212 DNA_pol_A DNA polymerase theta subunit EGI59836.1 Acromyrmex echinator 48% 12 4 9.7e−06
15870 DNA_pol_B2 Hypothetical protein XP_001599083.1 Nasonia vitripennis 45% very low very low
24190 DNA_pol_B2 Hypothetical protein XP_001600116.1 Nasonia vitripennis 54% very low very low
4358 DNA_pol_B2 DNA pol B2 domain-containing protein ACE75264.1 Glyptapanteles flavicoxis 70% 16 5 2.0e−08
4897 DNA_pol_B2 DNA pol B2 domain-containing protein ACE75264.1 Glyptapanteles flavicoxis 76% 94 0 1.5e−09
23368 DNA_pol_B2 DNA pol B2 domain-containing protein ACE75264.1 Glyptapanteles flavicoxis 65% very low very low
13723 DNA_pol_B2 DNA pol B2 domain-containing protein ACE75264.1 Glyptapanteles flavicoxis 68% 5 0 2.3e−06
7467 DNA_pol_B2 DNA pol B2 domain-containing protein ACE75264.1 Glyptapanteles flavicoxis 59% 14 3 3.3e−06
a

Expression levels are indicated as in Table 1.