Table 4.
Locus | PFAM DNA polymerase domain | Best nr hit | Accession no. | Best nr hit species | Identity | Adult mean RPKM (n = 6) | Pupal mean RPKM (n = 6) | P value |
---|---|---|---|---|---|---|---|---|
4754 | DNA_pol_B, DNA_pol_B_exo1 | DNA polymerase delta subunit | BAJ78765.1 | Vespa analis insularis | 77% | 58 | 46 | NS |
1052 | DNA_pol_B, DNA_pol_B_exo1 | DNA polymerase alpha subunit | XP_001121438.2 | Apis mellifera | 50% | 70 | 51 | 0.03 |
2371 | DNA_pol_B, DNA_pol_B_exo1 | DNA polymerase zeta subunit | XP_001607949.1 | Nasonia vitripennis | 50% | 45 | 35 | NS |
1137 | DNA_pol_B, DNA_pol_B_exo1, DNA_pol_B_exo2 | DNA polymerase epsilon subunit | XP_393171.4 | Apis mellifera | 68% | 23 | 21 | NS |
921 | DNA_pol_A | DNA polymerase subunit gamma-1, mitochondrial | EFN71060.1 | Camponotus floridanus | 62% | 15 | 38 | 0.001 |
1212 | DNA_pol_A | DNA polymerase theta subunit | EGI59836.1 | Acromyrmex echinator | 48% | 12 | 4 | 9.7e−06 |
15870 | DNA_pol_B2 | Hypothetical protein | XP_001599083.1 | Nasonia vitripennis | 45% | very low | very low | |
24190 | DNA_pol_B2 | Hypothetical protein | XP_001600116.1 | Nasonia vitripennis | 54% | very low | very low | |
4358 | DNA_pol_B2 | DNA pol B2 domain-containing protein | ACE75264.1 | Glyptapanteles flavicoxis | 70% | 16 | 5 | 2.0e−08 |
4897 | DNA_pol_B2 | DNA pol B2 domain-containing protein | ACE75264.1 | Glyptapanteles flavicoxis | 76% | 94 | 0 | 1.5e−09 |
23368 | DNA_pol_B2 | DNA pol B2 domain-containing protein | ACE75264.1 | Glyptapanteles flavicoxis | 65% | very low | very low | |
13723 | DNA_pol_B2 | DNA pol B2 domain-containing protein | ACE75264.1 | Glyptapanteles flavicoxis | 68% | 5 | 0 | 2.3e−06 |
7467 | DNA_pol_B2 | DNA pol B2 domain-containing protein | ACE75264.1 | Glyptapanteles flavicoxis | 59% | 14 | 3 | 3.3e−06 |
Expression levels are indicated as in Table 1.