Table 2.

Insertions within ORFs in C. difficile 630^a

Position in genome	Read depth	Systematic IDb	Name	Start	End	Length	Strand	Product
69341	679	CD0044		69040	69513	473	+	Putative membrane protein
370209	431	CD0308		369853	370353	500	+	Putative membrane protein
552402	1,762	CD0463		552158	552796	638	−	TetR family transcriptional regulator
1238338	447	CD1045		1237997	1239049	1,052	+	Putative membrane protein
1620690	914	CD1400		1620152	1620745	593	+	Conserved hypothetical protein
2311806	517	CD2001		2311732	2312130	398	−	Conserved hypothetical protein
2311818	2,120	CD2001		2311732	2312130	398	−	Conserved hypothetical protein
2511080	2,744	CD2170		2510369	2511097	728	+	Putative cNMP-binding regulatory protein
2704147	1,035	CD2337		2703553	2704473	920	−	Putative membrane protein
2856215	1,416	CD2475		2856026	2857321	1,295	−	Putative competence membrane protein
2856216	38	CD2475		2856026	2857321	1,295	−	Putative competence membrane protein
2922039	1,853	CD2528		2921714	2922397	683	+	Hypothetical protein
3196460	2,052	CD2752		3195904	3196569	665	+	Hypothetical protein
3376862	1,362	CD2887		3375865	3377019	1,154	+	Putative signaling protein
3507312	1,237	CD3019		3506993	3507925	932	−	Putative transporter
3557078	1,472	CD3063		3556888	3558102	1,214	−	Putative exported protein
3752367	1,224	CD3205		3752057	3752650	593	+	Putative nitroreductase
3947431	7,812	CD3377	mgtA	3947397	3950060	2,663	−	Magnesium-transporting ATPase, P-type 1
4028263	968	CD3437	cobS	4028256	4029029	773	−	Cobalamin synthase

^aGenes that are also targets for Tn916 in R20291 are shaded.

^bID, identification.