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. 2012 Jan 17;13(Suppl 1):S13. doi: 10.1186/1471-2164-13-S1-S13

Table 1.

Summary of analysis on miRNA reads

G1245N G1245T
# Reads 17,492,248 23,974,839
# detected pre-miRNAsa 542 556
# detected miRNAsa 688 705
# miRNAs at opposite armb 87 96
# isomiRs 5,132 5,305
# isomiRs with length equal to miRNA 542 569

We mapped the sequence reads back to human pre-miRNA, quantifying the expression levels of pre-miRNAs, mature miRNA and isomiRs.

a: The human pre-miRNA and mature miRNA are based on the definition of miRBase 16. Totally, there are 1,048 pre-miRNAs and 1,223 mature miRNAs, resulting in 1,366 miRNA/pre-miRNA pairs.

b: According to miRBase 16, 730 out of 1,048 human pre-miRNAs encode only one mature miRNA at one arm, either 5p or 3p arm. With the improvement on NGS's sequencing intensity, we detected additional opposite-arm mature miRNAs at the pre-miRNAs originally encoding only one miRNA.