Table 1. All QTL located in this study.
Chromosome1 | Trait2 | cM3 | F4 | a5 | d5 | Var%6 | 95% C.I. of QTLPosition7 |
2 | Total_IgG_week_0 | 18 cM | 5.47 | −3.67** | 6.22** | 2.11 | 6–124 cM |
2 | IgG2_minus_week_2 | 19 cM | 6.25 | −4.22* | 9.07** | 2.67 | 60–124 cM |
3 | IgG2_minus_week_2 | 37 cM | 5.19 | 1.89 | 6.77** | 2.24 | 0–87 cM |
3 | IgG2_week_2 | 98 cM | 4.88 | 1.03** | 0.35 | 2.12 | 0–98 cM |
7 | IgG2_week_0 | 69 cM | 5.21 | 0.74** | −0.1083 | 2.26 | 5–98 cM |
7 | Total_IgG_week_2 | 22 cM | 4.92 | 3.97* | −4.8454 | 2.14 | 10–84 cM |
8 | IgG1_AUC | 38 cM | 5.9 | 26.36*** | −3.34 | 2.52 | 6–118 cM |
8 | IgG1_week_7 | 44 cM | 5.63 | 4.77*** | 0.32 | 2.42 | 0–118 cM |
8 | Total_IgG_AUC | 43 cM | 4.98 | 25.80** | −3.62 | 2.12 | 6–118 cM |
8 | Total_IgG_week_7 | 47 cM | 5.53 | 5.63*** | 0.7997 | 2.40 | 0–118 cM |
9 | IgG2_week_2 | 45 cM | 5.47 | −0.87* | 0.87 | 2.37 | 0–60 cM |
10 | IgG2_week_0 | 53 cM | 7.01* | −0.07 | −1.03*** | 3.01 | 48–138 cM |
14 | IgG2_AUC | 15 cM | 6.82* | 13.67*** | 5.77 | 2.92 | 0–58.5 cM |
14 | IgG2_week_2 | 23 cM | 5.79 | 0.99** | 1.19* | 2.51 | 6.5–60 cM |
14 | IgG2_week_7 | 16 cM | 5.82 | 4.14*** | −0.13 | 2.51 | 0–65.5 cM |
15 | Total_IgG_week_0 | 60 cM | 4.85 | 3.64** | −2.73 | 2.10 | 0–80 cM |
17 | IgG2_minus_week_2 | 15 cM | 4.88 | −6.13 | 6.83 | 2.09 | 0–80 cM |
17 | IgG2_minus_week_2 | 57 cM | 4.92 | −6.44** | 3.51 | 2.10 | 0–80 cM |
17 | IgG1_week_2 | 76 cM | 8.17** | −4.30*** | 1.99 | 3.47 | 28–80 cM |
17 | Total_IgG_week_2 | 76 cM | 6.67* | −4.20*** | 1.51 | 2.87 | 28–81 cM |
18 | IgG2_week_2 | 19 cM | 7.29* | −3.58*** | −2.20* | 3.15 | 0–52 cM |
18 | IgG2_week_2 | 38 cM | 5.81* | −0.96** | −0.90 | 2.52 | 18–52.5 cM |
18 | Total_IgG_week_7 | 18 cM | 5.27 | −4.67** | −1.83 | 2.28 | 0–67 cM |
23 | IgG2_AUC | 27 cM | 4.97 | 17.17** | 1.71 | 2.15 | 0–80 cM |
23 | IgG2_week_2 | 31 cM | 6.82* | 2.03*** | 0.36 | 2.86 | 0–63 cM |
24 | IgG2_week_2 | 11 cM | 4.15 | 0.16 | 1.48** | 1.81 | 0–49 cM |
28 | IgG1_week_7 | 0 cM | 4.37 | 3.41* | 0.64 | 1.89 | 0–34 cM |
Chromosome: the chromosome each QTL is located on.
Trait: each trait is shown as follows: total IgG or IgG isotype response, followed by the week relative to vaccination.
cM: the QTL position on the chromosome (centiMorgans).
F: the F-statistic of each QTL, all are at least 5% chromosome wide, * 1% Chromosome wide and ** 5% Genome wide.
“a” and “d” are the additive and dominance effects of each QTL, * = p<5%, ** = p<1% and *** = p<0.01%.
Var%: the additive phenotypic variance explained by the QTL.
The 95% confidence intervals of each QTL (centiMorgans).