Table 2. Median/mean values of chemical property descriptors for anaerobic and aerobic metabolites.
Descriptors | Characterization | Median/Mean | P valued | |
Anaerobic metabolites (n = 1174) | Aerobic metabolites (n = 520) | |||
MWa | Molecular weight | 214.70/310.72 | 289.38/317.69 | 0.52 |
AREAa | Total molecular surface area | 425.95/545.21 | 508.90/549.64 | 0.74 |
VOLa | Total molecular volume | 613.75/822.00 | 803.80/856.24 | 0.17 |
AtomCounta | Total atom count | 26/36.48 | 36/43.23 | 2.95E-06 |
Carbonsb | Carbon atom count | 8/10.94 | 15/16.06 | 1.06E-23 |
Oxygensb | Oxygen atom count | 6/7.24 | 4/5.38 | 1.08E-13 |
Nitrogensb | Nitrogen atom count | 1/1.67 | 0/0.73 | 1.19E-24 |
Sulfursb | Sulfur atom count | 0/0.10 | 0/0.11 | 0.57 |
Phosphorusb | Phosphorus atom count | 0/0.68 | 0/0.08 | 6.12E-56 |
AlogP98c | Logarithm of partition coefficient, atom-type value, using latest parameters | −1.08/−0.80 | 1.26/1.43 | 2.51E-63 |
PSAa | Polar molecular surface area | 242.40/280.12 | 169.47/195.99 | 9.96E-28 |
PVa | Polar molecular volume | 170.50/247.37 | 127.61/165.27 | 1.71E-21 |
Acceptora | H-bond acceptor count | 6/7.66 | 4/5.56 | 1.21E-14 |
Donora | H-bond donor count | 3/3.81 | 2/2.37 | 8.83E-20 |
Hydrophobea | Hydrophobic fragment count | 1/1.43 | 2/2.45 | 3.09E-23 |
RingCounta | Ring count | 1/1.34 | 3/2.55 | 3.11E-38 |
AromaticRingsb | Aromatic ring count | 0/0.44 | 0/0.79 | 3.40E-13 |
BondCounta | Total bond count | 26/36.83 | 38/44.78 | 1.34E-07 |
RotBondsa | Rotatable bond count | 7/8.97 | 5/6.22 | 4.99E-18 |
Chirala | Chiral center count | 2/3.02 | 2/3.78 | 4.69E-04 |
calculated with Sybyl 7.0.
calculated with Pipeline Pilot.
calculated with Cerius2.
t-test.