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. 2012 Mar 15;8(3):e1002426. doi: 10.1371/journal.pcbi.1002426

Table 2. Median/mean values of chemical property descriptors for anaerobic and aerobic metabolites.

Descriptors Characterization Median/Mean P valued
Anaerobic metabolites (n = 1174) Aerobic metabolites (n = 520)
MWa Molecular weight 214.70/310.72 289.38/317.69 0.52
AREAa Total molecular surface area 425.95/545.21 508.90/549.64 0.74
VOLa Total molecular volume 613.75/822.00 803.80/856.24 0.17
AtomCounta Total atom count 26/36.48 36/43.23 2.95E-06
Carbonsb Carbon atom count 8/10.94 15/16.06 1.06E-23
Oxygensb Oxygen atom count 6/7.24 4/5.38 1.08E-13
Nitrogensb Nitrogen atom count 1/1.67 0/0.73 1.19E-24
Sulfursb Sulfur atom count 0/0.10 0/0.11 0.57
Phosphorusb Phosphorus atom count 0/0.68 0/0.08 6.12E-56
AlogP98c Logarithm of partition coefficient, atom-type value, using latest parameters −1.08/−0.80 1.26/1.43 2.51E-63
PSAa Polar molecular surface area 242.40/280.12 169.47/195.99 9.96E-28
PVa Polar molecular volume 170.50/247.37 127.61/165.27 1.71E-21
Acceptora H-bond acceptor count 6/7.66 4/5.56 1.21E-14
Donora H-bond donor count 3/3.81 2/2.37 8.83E-20
Hydrophobea Hydrophobic fragment count 1/1.43 2/2.45 3.09E-23
RingCounta Ring count 1/1.34 3/2.55 3.11E-38
AromaticRingsb Aromatic ring count 0/0.44 0/0.79 3.40E-13
BondCounta Total bond count 26/36.83 38/44.78 1.34E-07
RotBondsa Rotatable bond count 7/8.97 5/6.22 4.99E-18
Chirala Chiral center count 2/3.02 2/3.78 4.69E-04
a

calculated with Sybyl 7.0.

b

calculated with Pipeline Pilot.

c

calculated with Cerius2.

d

t-test.