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. Author manuscript; available in PMC: 2013 Apr 1.
Published in final edited form as: J Biomed Inform. 2011 Dec 2;45(2):323–336. doi: 10.1016/j.jbi.2011.11.012

Table 3.

Top thirty ranked gene concepts for Breast Carcinoma (C0678222).

rank CUI Gene Concept R value percentile PubMed ID
2 ★ C1537910 MIRLET7A1 1.04687 0.006818%
2 ★ C1537912 MIRLET7A3 1.04687 0.006818%
3 ★ C0079419 TP53 1.04684 0.010227%
4 ★ C0919524 ATM 1.03027 0.013637%
5 ✓ C0376571 BRCA1 1.00283 0.017046% 8807330
6 ★ C1333544 FGFR4 0.966285 0.020455%
7 ✓ C0242957 ERBB2 0.961433 0.023864% 9797688
8 ✓ C0694884 MEN1 0.939749 0.027273% 15168774
9 ✓ C0162832 APC 0.93778 0.030682% 11448917
10 ✓ C0694872 CDH1 0.934644 0.034091% 11597316
11 ★ C1537713 MIR17 0.933832 0.037500%
12 ✓ C1332802 CTLA4 0.914895 0.040910% 16527605
13 ★ C1336686 TSSC4 0.91024 0.044319%
14 ✓ C1537734 MIR29B2 0.899002 0.047728% 19639033
15 ★ C1537859 MIR221 0.898388 0.051137%
16 ✓ C0812241 BRAF 0.896812 0.054546% 12068308
17 ★ C1825998 MIR20A 0.896133 0.057955%
18 ★ C1337001 WNT3 0.893316 0.061364%
19 ★ C1537773 MIR126 0.884353 0.064773%
20 ✓ C0812265 ERBB3 0.88357 0.068183% 1333787
21 ✓ C1332416 BIRC5 0.882932 0.071592% 16873289
22 ★ C0694883 STK11 0.882428 0.075001%
23 ✓ C0812267 ERBB4 0.874504 0.078410% 15735025
24 ★ C1836306 MIR124-1 0.871343 0.081819%
25 ✓ C1333206 DDR1 0.871328 0.085228% 10923103
26 ✓ C1537715 MIR19A 0.869182 0.088637% 21059650
27 C1537699 MIR1-1 0.868504 0.092047%
28 ★ C1335274 PTK6 0.867511 0.095456%
29 ✓ C1835840 MIR29B1 0.86677 0.098865% 21359530
30 ✓ C0694889 RB1 0.860263 0.102274% 11108660

Confirmed disease gene concepts (by available links connecting genes to Breast Carcinoma) are marked by ★. Gene concepts having been studied for Breast Carcinoma in literature are marked by ✓. One paper for each of these gene concepts is listed by its PubMed ID.