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. 2012 Jan 23;28(6):815–822. doi: 10.1093/bioinformatics/bts038

Table 2.

The number of identified GSL pathway genes in the A.thaliana microarray dataset from tissues subjected to oxidative stress using (a) shoot tissue only, seed-gene-set I; (b) shoot tissue only, seed-gene-set II; (c) shoot and root tissues, seed-gene-set I; (d) shoot and root tissues, seed-gene-set II

Top pwsrc.knorm pwsrc.null pearson.mean pearson.max GLM
(a) 10 4 0 2 1 0
20 6 1 3 4 0
30 7 1 3 5 0
50 8 1 4 7 0

(b) 10 6 0 4 2 2
20 11 3 4 4 3
30 14 3 5 6 4
50 14 5 8 8 5

(c) 10 9 0 3 0 3
20 11 0 3 0 5
30 12 0 3 1 7
50 12 0 3 2 10

(d) 10 6 0 5 1 4
20 10 0 7 1 5
30 13 0 9 1 9
50 19 0 9 1 12