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. Author manuscript; available in PMC: 2013 Mar 19.
Published in final edited form as: Chem Res Toxicol. 2012 Feb 21;25(3):730–740. doi: 10.1021/tx200531y

Table 6.

Kinetic parameters of nucleotide incorporation onto damaged DNA catalyzed by hPolτ.

dNTP Kd, dNTP
(μM)
kp
(s−1)
kp/Kd, dNTP
(μM−1s−1)
Efficiency
Ratioa,b
Fidelityc Fidelity
Ratiob,d
Probabilitye
(%)
Template dGAP (20-mer/26-mer-dGAP)
dCTP 380 ± 66 (8.8 ± 0.6)×10−2 2.3×10−4 7.0 - - 97
dATP 338 ± 22 (10.3 ± 0.2)×10−4 3.0×10−6 5.0 1.3×10−2 1.4 1.3
dGTP 252 ± 29 (5.3 ± 0.2)×10−4 2.1×10−6 7.6 9.0×10−3 0.9 0.9
dTTP 762 ± 60 (13.1 ± 0.5)×10−4 1.7×10−6 118 7.3×10−3 0.1 0.7
Template dC – pause site (21-mer/26-mer-dGAP)
dGTP 264 ± 76 (5.9 ± 0.6)×10−5 2.2×10−7 4.5×103 - - 47
dATP ND ND - - - - -
dCTP ND ND - - - - -
dTTP 573 ± 73 (14.1 ± 0.8)×10−5 2.5×10−7 680 5.3×10−1 5.5 53
a

Calculated as (kp/Kd, dNTP)normal/(kp/Kd, dNTP)damaged.

b

The values are from Supplementary Table 3 using control 26mer DNA template.

c

Calculated as (kp/Kd, dNTP)incorrect/[(kp/Kd, dNTP)correct + (kp/Kd, dNTP)incorrect].

d

Calculated as Fidelitydamaged/Fidelitynormal.

e

Calculated as ((kp/Kd, dNTP)damaged/[Σ(kp/Kd, dNTP)damaged])×100.

ND denoted ‘not determined’.

All given errors were derived from data fitting.