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. 2011 Oct 10;286(48):41812–41825. doi: 10.1074/jbc.M111.255711

TABLE 2.

Frequency of 80bp SMYD1 promoter motif near integration site sets in the human genome

Significant deviation from LEDGF BC in Mann-Whitney test is shown.

Cell line No sites No./5-kb window No./10-kb window
EIAV sites WT 717 45.3 65.8
KD 448 40b 59.8a
LEDGF BC 862 47.8 70.2
ΔN93-LEDGF 157 43.9 62.4c
PWWPHDGF-LEDGF 610 44.6 67.4
PWWPHRP2-LEDGF 802 48.6 68
HDGF-LEDGF325–530 873 52.8 71.7
MRC sites MRC WT 2151 35.6 52.5
MRC KD 1344 34.4 53.6
MRC LEDGF BC 2586 34.4 53.4
MRC ΔN93-LEDGF 471 36.5 55.2
MRC PWWPHDGF-LEDGF 1827 34 54.2
MRC PWWPHRP2-LEDGF 2406 33.4 52.1
MRC HDGF-LEDGF325–530 2619 34.1 53.4

a p < 0.001.

b p < 0.01.

c p < 0.05.