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. 2012 Mar 20;7(3):e33091. doi: 10.1371/journal.pone.0033091

Figure 7. Pattern recognition receptors (PRRS) in Mytilus edulis.

Figure 7

Schematic overview of protein structures and number of contigs (in brackets) of identified PRRS in the M. edulis transcriptome. Protein domains are: Leucine-rich-repeat (LRR), transmembrane (TM), TLR and IL-1 receptor (TIR), Peptidoglycan recognition protein/amidase 2 (PGRP/ami_2), Glycosyl hydrolase 16 (Glyco_Hydro_16), Bactericidal permeability-increasing protein (BPI)/Lipopolysaccharide-binding protein (LBP)/Cholesteryl ester transfer protein (CETP) N-terminal (BPI1) and C-terminal domain (BPI2), caspase recruitment domain (CARD), DEAD and DEAH box helicases (DEXD), Helicase_C (Helic_c) and the C-teminal regulatory domain of RIG-I (RIG-I_c_RD). Contig length was set generic, proteins domains were deduced from SMART or NCBI Dart using default thresholds.