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. Author manuscript; available in PMC: 2013 Jan 1.
Published in final edited form as: Genet Epidemiol. 2011 Dec 7;36(1):3–16. doi: 10.1002/gepi.20632

Table 3.

NSABP GO gene-set scan results.

GO Namespace GO Term ID GO Term Definition No. genes in set z-score p-value
Cellular Component GO:0005869 dynactin complex 6 2.796 0.927
GO:0000127 transcription factor TFIIIC complex 6 2.729 0.954
GO:0033193 Lsd1/2 complex 1 2.671 0.972
GO:0005896 interleukin-6 receptor complex 3 2.655 0.972
GO:0005595 collagen type XII 1 2.627 0.938

Biological Process GO:0010533
GO:0010536
regulation of activation of Janus kinase activity
positive regulation of activation of Janus kinase activity
2 4.083 0.507
GO:0019048 virus-host interaction 21 3.689 0.835
GO:0046968 peptide antigen transport 3 3.527 0.936
GO:0002690 positive regulation of leukocyte chemotaxis 23 3.474 0.954
GO:0030237 1 3.453 0.959
GO:0019101
GO:0042703
female sex determination
female somatic sex determination menstruation

Molecular Function GO:0003709 RNA polymerase III transcription factor activity 10 3.677 0.790
GO:0070119 ciliary neurotrophic factor binding 1 3.338 0.968
GO:0004915
GO:0019981
interleukin-6 receptor activity
interleukin-6 binding
2 3.137 0.997
GO:0004890 GABA-A receptor activity 18 3.038 0.999
GO:0004897 ciliary neurotrophic factor receptor activity 4 3.005 1.000