Table 1.

Characteristics of the 22 SSR markers used for genotyping

Origin	SSR	EMBL1	No. of indels2	Min.–max. size (bp)	Al < 1 %4	Main allele frequency5	Total alleles	LG6	Motif
AA Gobusik	Ma1-32	(Crouch et al. 1998)	3x; 1 bp	208–251	7	0·53	20	4	(GA)17AA(GA)8AA(GA)2
	Ma3-90	(Crouch et al. 1998)	–	123–157	4	0·54	18	3	(CT)11
	mMaCIR01	X872623	1x; 16 bp	219–295	5	0·39	22	2	(GA)20
	mMaCIR03	X872633	3x; 1 bp	91–119	4	0·71	14	1	(GA)10
	mMaCIR07	X872583	–	127–165	3	0·58	18	1	(GA)13
	mMaCIR08	X872643	–	233–279	3	0·85	12	1	(TC)6N24(TC)7
	mMaCIR13	X907453	–	251–279	0	0·82	12	3	(GA)16N76(GA)8
	mMaCIR24	Z859723	–	218–278	9	0·84	19	5	(TC)7
	mMaCIR27	Z859623	–	212–240	4	067	12	5	(GA)9
	mMaCIR39	Z859703	–	310–350	7	0·77	20	2	(CA)5GATA(GA)5
	mMaCIR40	Z859773	1 bp	149–187	8	0·62	17	8	(GA)13
	mMaCIR45	Z859683	4x; 1 bp	253–275	1	0·84	9	10	(TA)4CA(CTCGA)4
BB Pisang Klutuk Wulung	MMaCIR150	AM950440	1 bp	238–251	0	0·84	05	6	(CA)10
	MMaCIR152	AM950442	1 bp	139–175	1	0·41	12	4	(CTT)18
	MMaCIR164	AM950454	1x; 52 bp + 1x 1 bp + 1x; 38 bp	236–390	7	0·37	17	4	(AC)14
	mMaCIR195	AM950461	–	239–295	11	0·55	21	5	(GA)17
	mMaCIR196	AM950462	2x; 1 bp	147–173	3	0·70	12	7	(TA)4(TC)17(TC)3
	mMaCIR214	AM950480	1x; 1 bp	96–116	2	0·69	6	–	(AC)7
	mMaCIR231	AM950497	1x; 1 bp	219–267	5	0·53	19	–	(TC)10
	mMaCIR260	AM950515	–	175–211	6	0·69	10	9	(TG)8
	mMaCIR264	AM950519	3x; 1 bp	215–273	7	0·44	18	4	(CT)17
	mMaCIR307	AM950533	–	141–153	0	0·82	6	–	(CA)6

¹ EMBL, registration number on EMBL database or publication reference.

² Number of alleles deviating from stepwise model (number x); size of the observed indels (bp).

³ Lagoda et al. (1998).

⁴ Rare alleles with a frequency lower than 1 %.

⁵ Highest frequency of an allele observed at this locus.

⁶ Linkage groups (Hippolyte et al., 2010).