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. 2012 Mar 23;7(3):e34113. doi: 10.1371/journal.pone.0034113

Table 2. Primers and probes employed for genotyping three promoter SNPs in the FCN2 gene.

Position Primer/Probe Sequence
−986G>A Primers 5′-tgatcttgccaaggaagaaggc-3′
5′- ccactaccaccaccgca -3′
Probes 5′-YAK-acctgccgccatcgg- BBQ3
5′ -FAM-acctgctgccatcggga- BBQ3′
−602G>A Primers 5′-tccccactcttctctcctttcc-3′
5′-cctggggcagtatgtagagca-3′
Probes 5′-YAK-tcctgttcgtgtgcccc-BBQ3′
5′-FAM-tcctgttcatgtgcccctg-BBQ3′
−4A>G Primers 5′- aagatgagaaattggagtctgaggga- 3′
5′-gaaagagagcagcagggtgg-3′
Probes 5′-YAK- ctccatctcctctggtctttgctt - BBQ3′
5′-FAM- agctccatctcttctggtctttgc - BBQ3′

YAK and FAM are the reporter fluorophores Yakima Yellow and Fluorescein, respectively.

Each probe carries at the 3′-end the dark BBQ (BlackBerry Quencher).