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. 2012 Mar 21;7(3):e33763. doi: 10.1371/journal.pone.0033763

Table 4. Relevant biological processes significantly enriched in the two lists of differentially expressed genes.

IDa Name nG b P-valuec
Basque highly expressed genes list
30518 Steroid hormone receptor signaling pathway 10 5.4E-03
30522 Intracellular receptor-mediated signalling pathway 11 7.0E-03
2761 Regulation of myeloid leukocyte differentiation 7 7.3E-03
19216 Regulation of lipid metabolic process 13 7.6E-03
45670 Regulation of osteoclast differentiation 5 1.7E-02
16042 Lipid catabolic process 14 1.9E-02
6006 Glucose metabolic process 16 2.1E-02
31328 Positive regulation of cellular biosynthetic process 40 2.3E-02
51173 Positive regulation of nitrogen compound metabolic process 39 2.4E-02
9891 Positive regulation of biosynthetic process 40 2.7E-02
19318 Hexose metabolic process 18 2.9E-02
45941 Positive regulation of transcription 34 2.9E-02
45449 Regulation of transcription 107 3.0E-02
48511 Rhythmic process 9 3.1E-02
15908 Fatty acid transport 5 3.4E-02
45935 Positive regulation of nucleotide, nucleic acid metabolic process 37 3.5E-02
10628 Positive regulation of gene expression 34 3.7E-02
46545 Development of primary female sexual characteristics 7 3.9E-02
46660 Female sex differentiation 7 3.9E-02
6357 Regulation of transcription from RNA polymerase II promoter 41 4.0E-02
10557 Positive regulation of macromolecule biosynthetic process 37 4.3E-02
9266 Response to temperature stimulus 8 4.4E-02
45637 Regulation of myeloid cell differentiation 8 4.4E-02
9266 Response to temperature stimulus 4 4.4E-02
45638 Negative regulation of myeloid cell differentiation 5 4.9E-02
Large White highly expressed genes list
22610 Biological adhesion 37 1.4E-03
7155 Cell adhesion 37 1.4E-03
7517 Muscle organ development 21 1.9E-03
51258 Protein polymerization 6 8.1E-03
40012 Regulation of locomotion 16 8.6E-03
30334 Regulation of cell migration 15 1.2E-02
48232 Male gamete generation 17 1.3E-02
7283 Spermatogenesis 17 1.3E-02
51270 Regulation of cell motion 16 1.4E-02
6935 Chemotaxis 11 1.5E-02
42330 Taxis 11 1.5E-02
7015 Actin filament organization 9 1.8E-02
51674 Localization of cell 19 2.0E-02
48870 Cell motility 19 2.0E-02
6928 Cell motion 27 2.1E-02
16477 Cell migration 18 2.2E-02
15918 Sterol transport 5 2.6E-02
9261 Ribonucleotide catabolic process 5 2.6E-02
30301 Cholesterol transport 5 2.6E-02
48146 Positive regulation of fibroblast proliferation 5 3.2E-02
7276 Gamete generation 20 3.4E-02
30029 Actin filament-based process 19 3.8E-02
48729 Tissue morphogenesis 12 4.0E-02
8154 Actin polymerization or depolymerization 4 4.6E-02
2562 Somatic diversification of immune receptors via germline recombination 4 4.6E-02
6775 Fat-soluble vitamin metabolic process 4 4.6E-02
16444 Somatic cell DNA recombination 4 4.6E-02
30036 Actin cytoskeleton organization 18 4.8E-02
a

Gene ontology identification number.

b

nG = number of genes in the category.

c

Modified Fisher's exact test P value.