Table 3. Common haplotypes constructed with SNPs rs2183589, rs2230688, rs11702425 and rs7499 in COL18A1 gene of the 302_Beijing samples.
Haplotypes | HCC (n = 169) | CHB (n = 203) | P | OR (95%CI) |
C-G-C-T | 42.84 (12.7%) | 24.33 (6.0%) | 0.003 | 2.20 (1.31–3.71) |
C-G-T-C | 77.97 (23.1%) | 113.98 (28.1%) | 0.06 | 0.73 (0.52–1.02) |
C-G-T-T | 63.69 (18.8%) | 76.35 (18.8%) | 0.82 | 0.96 (0.66–1.39) |
C-T-T-C | 24.70 (7.3%) | 51.37 (12.7%) | 0.01 | 0.52 (0.31–0.86) |
C-T-T-T | 68.67 (20.3%) | 40.61 (10.0%) | 0.0002 | 2.22 (1.46–3.39) |
others | 60.13 (17.8%) | 99.36 (24.5%) |