Skip to main content
. 2012 Mar 27;7(3):e32410. doi: 10.1371/journal.pone.0032410

Table 3. Parameter estimates from phylogenetic analyses.

Parameter Maximum likelihood Mean (MrBayes) 95% credible interval
−Ln(likelihood) 4947.80616 5126.72
Base frequencies:
A 0.308362 0.304453 0.28376–0.325386
C 0.306745 0.313918 0.294273–0.333866
G 0.10933 0.10606 0.092488–0.120346
T 0.275564 0.275569 0.257436–0.294444
Rate matrix R:
AC 1.54978 0.070678 0.051396–0.091749
AG 4.54285 0.283505 0.23189–0.338771
AT 1.54978 0.114535 0.089641–0.143007
CG 1 0.053364 0.027305–0.086909
CT 6.3631 0.387983 0.339399–0.438247
GT 1 0.089936 0.052845–0.135436
Relative Site Rates:
Cyt b position1 0.39758 0.383505 0.300655–0.477924
Cyt b position 2 0.11616 0.114631 0.074023–0.163621
Cyt b position 3 2.59399 2.645424 2.474685–2.813977
Cont. Region 0.90202 0.868631 0.741192–1.002187