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. 2004 Jan 20;4:4. doi: 10.1186/1471-2180-4-4

Table 4.

Homologous regions of e14 with other phage and bacterial genomes. Regions of similarity of e14 with other genomes. All the regions indicated show greater than 85% identity in the region of the match. The matching regions in e14 are ordered based on position in the e14 genome. Figure 1 provides a schematic representation of this table.

Organism Region e14 Region Correspond e14 protein
S. flexneri phage V 24627–25019 4859–5249 ymfI
25540–27256 5903–9926 ymfK, ymfL, ymfM
1156–2211 8192–9247 ymfN
15305–16983 9926–11604 ymfO, ycfK

S. typhimurium phage ST64B 27440–27600 5031–5190 ymfI
29587–29625 7544–7582 ymfL
1140–1405 8228–8493 ymfN
1608–2840 8696–9928 ymfN

E. coli CFT073 38985–38623 4859–5220 ymfI
37962–37900 5900–5963 -
36862–36316 7035–7581 ymfL
36307–35709 7596–8194 ymfM

E. coli O157:H7 153052–153211 6–165 icd
25330–25963 11395–14028 pin
23421–23500 11517–11596 ycfK
24611–24263 12232–12580 ymfS, tfaA

S. flexneri 2a str. 301 1197399–1197608 7–216 icd
325210–325530 11604–11284 ycfk
921146–921257 13459–13570 pin
2684817–2685390 14032–13459 pin

Bacteriophage HK97 20864–20264 12256–12856 ymfS, tfaA
19918–19709 13205–13414 pin

Bacteriophage p27 22957–23180 8225–8448 ymfN
23410–23498 8678–8766 ymfN
23764–23883 9035–9154 ymfN
23735–23883 9006–9154 ymfN
23941–24443 9212–9714 ymfR, ymfO

Plasmid p15B (X62121) 3853–3216 12324–12961 tfaA, stfE (-)
3890–4390 12918–13415 stfE
6180–6377 13218–13415 stfE
4700–4880 13211–13415 stfE
2998–2803 13215–13410 stfE
5203–5418 13200–13415 stfE
5701–5905 13211–13415 stfE
6438–6879 13476–13917 Pin

S. enterica serovar Typhi Ty2 3525667–3526015 12581–12233 tfaA, stfE
3526698–3527201 13396–13898 stfE, pin
3524880–3525072 13410–13218 stfE
2754201–2754696 13898–13404 stfE, pin
1410749–1410959 13205–13415 stfE
1411306–1411507 13218–13419 stfE
1408359–1408791 13908–13476 Pin
1409336–1409551 13415–13200 stfE
1408852–1409071 13415–13196 stfE